Alistipes sp. dk3624: GFH31_08965
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Entry
GFH31_08965 CDS
T06260
Symbol
xseB
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
GFH31_08965 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_08965 (xseB)
Enzymes [BR:
ald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
GFH31_08965 (xseB)
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
GFH31_08965 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF4088
FIVAR
Motif
Other DBs
NCBI-ProteinID:
QGA23951
LinkDB
All DBs
Position
2115031..2115228
Genome browser
AA seq
65 aa
AA seq
DB search
MEKSKITYAQAIAEVEQILERFNNEQMNVDELGAQVKRAAELIRLCKERLRKAEKEVDEA
LKEEE
NT seq
198 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaatcgaaaattacatatgcgcaggcgatcgccgaagtggagcagatcctcgag
cggtttaacaatgagcagatgaacgtcgacgaactgggcgctcaggtcaaacgggccgcc
gaactgatccggttgtgcaaggaacggctgcgaaaggccgaaaaagaggtcgacgaggcc
ctgaaagaggaggaatag
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