Alistipes sp. dk3624: GFH31_10745
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Entry
GFH31_10745 CDS
T06260
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ald
Alistipes sp. dk3624
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_10745 (gyrB)
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_10745 (gyrB)
Enzymes [BR:
ald01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
GFH31_10745 (gyrB)
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Topoisomerases
GFH31_10745 (gyrB)
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
GFH31_10745 (gyrB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
GyrB_hook
Motif
Other DBs
NCBI-ProteinID:
QGA24272
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All DBs
Position
2515525..2517489
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AA seq
654 aa
AA seq
DB search
MSVEEKDQIQQTGEAYSASSIQVLEGLEAVRKRPAMYIGDVGVRGLHHLVYEVVDNSIDE
ALAGYCSRIDVFVNEDNSITVKDDGRGIPTDMHEKEGRPALEVVLTVLHAGGKFNKDSYK
VSGGLHGVGVSCVNALSTLLVAEVHRGGKIFRENFSKGVPQGTMEIIGETTEDDHGTIIT
FKPDSSIFTVTEYDYETLASRLRELAYLNKGIKLNITDLRTKNENGESVHDEYYSTEGLK
EFVKFLDASRESLIENTIYIDTEKDGVPVEVAMQYNTSFSENVHSYVNNINTIEGGTHLT
GFRRALTRTLKKYAEDSGMLTKLKFEINGDDFREGLTAIVSVKVQEPQFEGQTKTKLGNG
EVAGVVDQAISGALTHYLEENPKDARAIVSKVILAATARHAARKARELVQRKTVLSGSGL
PGKLADCASRDRDQAEIFFVEGDSAGGSAKQGRDRNFQAIMPLRGKILNVEKAMEHRIFE
NEEIRNIFTALGVTIGTEDDSKALNLDKLRYGRVIIMTDADVDGSHIATLMLTFFFRYMN
NLIKNGHVYIATPPLYQVKKGKNSRYCWTEEEREAALAEFGSKGAHVQRYKGLGEMNPEQ
LWETTMSPETRILRQVNIESAAEADRIFSMLMGDDVPPRREFIERHAKYANIDI
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtagaggaaaaagatcagatccaacaaaccggggaggcgtactccgcttccagc
attcaggtgctcgagggcctcgaggcggtgcgcaagcgccccgcgatgtatatcggggac
gtcggagtccgggggttgcaccatttggtgtacgaagtggtcgacaactcgatcgacgag
gcgttggccgggtactgttcccgcatcgacgttttcgtcaacgaggacaactcgatcacc
gttaaggacgacgggcgcggtattccgaccgatatgcacgagaaggaagggcgtcccgcc
ctcgaagtggtgcttacggtgctgcatgccggcggtaagttcaacaaggacagttataag
gtgtcgggcggtctgcacggcgtcggcgtgtcctgcgtgaatgcgctctccacgctgctg
gtcgccgaagtgcaccgcggaggaaaaatcttccgggaaaacttcagcaagggcgttccg
cagggaaccatggaaatcatcggcgagacgaccgaggacgatcacggaacgatcattacc
ttcaaacccgacagttcgatctttacggtcaccgaatacgattatgagacgctggcctcg
cgcctgcgcgaattggcttacctgaacaagggaattaagctcaatatcaccgacctgcgc
acgaagaacgaaaacggggagtccgttcacgacgaatattactcgaccgaagggttgaaa
gaattcgtcaagttcctcgacgccagccgcgaatcgctgatcgaaaacacgatctatatc
gataccgaaaaagacggcgttccggtcgaggtggcgatgcagtacaatacgagtttctcc
gagaacgtgcattcgtacgtcaacaatatcaatacgatcgagggcggtacgcacctgacc
ggtttccgccgggcgctgacccggacgctgaagaaatacgccgaagattcgggtatgctg
accaagctgaaattcgagatcaacggcgacgacttccgcgaagggcttaccgcgatcgtc
tcggtcaaggtgcaggagccgcagttcgaaggacagaccaagaccaaactcggcaacggc
gaagtcgccggcgtcgtcgatcaggcgatttccggcgcgttgacgcattatctggaagag
aacccgaaagacgcccgcgccatcgtgtcgaaggtgatcctggccgccacggcccggcat
gcggcccgcaaggcgcgcgaactcgtacagcgcaaaacggtgctgtccggatcggggctg
cccggcaagctggccgactgcgcgtcgcgcgatcgcgatcaggccgagattttcttcgtc
gagggcgattccgcaggcggttcggccaaacagggccgcgaccggaattttcaggctatc
atgccgttgaggggtaagatactgaatgtcgagaaggcgatggagcaccggatcttcgag
aacgaggagatccgcaatatcttcactgcgctcggcgtgacgatcggaaccgaagacgac
agcaaggcgctgaacctcgataagttgcgttacggccgcgtgattattatgaccgatgcc
gatgtcgacggcagccacatcgcgacgttgatgctaacgttcttcttccgctacatgaac
aacctgatcaaaaacggacacgtctatatcgcgacgccgccgctctatcaggtcaaaaag
ggtaagaatagtcgctattgttggacggaagaggagcgcgaggcggctttggcggaattc
gggtcgaaaggggcccatgtacagcgttacaaaggtctgggggaaatgaatcccgaacag
ttgtgggaaacgaccatgtcgcccgaaacgcgtatcctgcgtcaggtgaatatcgagagc
gccgccgaagcggatcgtatcttctcgatgctgatgggcgacgacgtgccgccgcgccgg
gaatttatcgaaaggcatgccaagtatgccaacatcgatatttag
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