Alistipes sp. dk3624: GFH31_10870
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Entry
GFH31_10870 CDS
T06260
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03030
DNA replication
ald03430
Mismatch repair
ald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH31_10870
03430 Mismatch repair
GFH31_10870
03440 Homologous recombination
GFH31_10870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_10870
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_10870
Enzymes [BR:
ald01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH31_10870
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH31_10870
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH31_10870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo2
Motif
Other DBs
NCBI-ProteinID:
QGA24296
LinkDB
All DBs
Position
complement(2549355..2550128)
Genome browser
AA seq
257 aa
AA seq
DB search
MKLNLKNPIVFFDLETTGVDPAKDRIVEISLAKVMPDGSQETKTRRLNPEMHIPEAASAI
HHIYDQDVADCPTFQMIAKSLWSYIEGCDLAGYNSNKFDIPVLVEEFLRAGIDVDLKKRR
FIDVQNIFHKMEQRTLVAAYKFYCQKDLTEAHSAEADTLATLEVLQAQLDRYPDDLKNDI
GFLAEFSCRDQNVDYAGRIVYNDKGVEVFNFGKHKGRSVSEVFRTEPSYYSWMMNGDFPQ
YTKKVITAIRLRDINGK
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgaatctgaaaaatccgatcgtcttcttcgacctcgaaacgaccggagtcgat
cctgccaaagaccggatcgtcgaaatatcgctcgcaaaagtaatgcccgacggcagccag
gagaccaaaacccgccggctgaacccggagatgcacattcccgaagcggcatcggccatc
caccatatctacgaccaggacgtagccgactgtccgactttccagatgatcgccaaatcg
ctgtggagctacatcgaaggatgcgacttggccggatacaattccaacaagttcgacatc
ccggtgctggtcgaagagttcctgcgagccggtatagacgtcgacctgaaaaaacgccgt
ttcatcgacgtgcagaacattttccacaagatggaacaacgcacgctggtcgccgcatac
aaattctactgccagaaagacctgaccgaagcccactcggccgaagccgatacgctggcc
accctggaagtgttgcaagcccagctcgaccgttaccccgacgacctgaaaaacgacatc
ggttttctggccgaattttcgtgccgcgaccaaaacgtcgactatgccggacgtatcgta
tacaacgacaagggagtcgaagtgttcaatttcggcaagcacaaaggcaggtccgtgtcg
gaagtgttccgaacggaaccgagttattactcgtggatgatgaacggcgatttcccgcag
tatacgaaaaaagtcatcacggcgatccgcctgcgggacatcaatggcaaataa
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