Alistipes sp. dk3624: GFH31_11235
Help
Entry
GFH31_11235 CDS
T06260
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03030
DNA replication
ald03430
Mismatch repair
ald03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GFH31_11235 (holA)
03430 Mismatch repair
GFH31_11235 (holA)
03440 Homologous recombination
GFH31_11235 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ald03032
]
GFH31_11235 (holA)
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_11235 (holA)
Enzymes [BR:
ald01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
GFH31_11235 (holA)
DNA replication proteins [BR:
ald03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
GFH31_11235 (holA)
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
GFH31_11235 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
QGA24362
LinkDB
All DBs
Position
2630430..2631503
Genome browser
AA seq
357 aa
AA seq
DB search
MAKSSKKSFKESVADYAALSERIGRRQFAPVYLLMGEEPYFIDMLAERLGETILSPEERA
FDQTVVYGRDTEAGAIVNFCRQMPMMGAFQVVIVREAQTLRRIDQLSLYTSAPSPTTILV
LCHKEKGLDKRSQLYKQIEAKGAVFESVAPRDYEIAGWLGDFVRSKGCSIDPKAAAMLTD
HLGADISKISNELGKLLTYLPEGTKQITAAHIEQNIGISKDFNNFELTRAMSERNVARAM
LIADHFARNPKENPLLVTVSALFTHFQRIFILNYQKWYCRRKGAPMPPDAELARMLKLPT
AFFLKEYQQAAALYPNNKVFAILGLLREYDLKSKGMNTGQADGGELLKELLLKIFLL
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atggcgaaaagcagtaaaaagagctttaaggagagtgtggccgattatgcggcgttgtcc
gaacggatcggccggaggcagttcgcgccggtctatctgctgatgggcgaggagccctat
tttatcgatatgctggccgaacggctcggcgagacgatcctgtcgcccgaggagcgggcc
ttcgaccagacggtcgtttacggcagggataccgaagccggggcgatcgtcaatttttgc
cgtcagatgccgatgatgggggcttttcaggtggtgatcgtccgcgaagcgcagacgttg
cgccggatcgaccagttgtcgctgtatacgtcggcgccctccccgactacgatcctcgtg
ctgtgtcataaagaaaaaggactcgataaacgtagtcagctctacaagcagatcgaggct
aaaggagcggttttcgaatcggtcgctccgcgcgattacgagatcgccggttggctcggc
gatttcgtccgcagtaaaggatgttcgatcgacccgaaagcggcagccatgttgaccgac
cacctcggcgccgatatttcgaagatcagcaacgaactgggcaaactgctcacctatctg
cccgaaggaacgaagcagatcacggccgcgcacatcgaacagaatatcggcatcagcaaa
gatttcaataatttcgagctgacgcgggcgatgtccgagcggaacgtggcccgggcgatg
ctgattgccgatcatttcgcccgcaatccgaaagagaatccgttgctggtgaccgtcagc
gcgctgtttacgcattttcagcggatttttatactgaattaccaaaagtggtattgccgc
cgcaaaggcgcgccgatgccgccggatgcggaattggcaaggatgttgaagctgcccacg
gcgttctttctgaaggagtaccagcaggcggctgcgctctatccgaacaacaaggttttt
gcgattctcggcctgttgcgcgagtatgacctgaaaagcaaaggcatgaataccgggcag
gccgacggcggcgagttgctgaaggagttgctgttaaaaatatttttactctga
DBGET
integrated database retrieval system
