Alistipes sp. dk3624: GFH31_11385
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Entry
GFH31_11385 CDS
T06260
Name
(GenBank) deoxyribonuclease IV
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
ald
Alistipes sp. dk3624
Pathway
ald03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ald00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GFH31_11385
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ald03400
]
GFH31_11385
Enzymes [BR:
ald01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
GFH31_11385
DNA repair and recombination proteins [BR:
ald03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
GFH31_11385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
QGA24390
LinkDB
All DBs
Position
complement(2669408..2670253)
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AA seq
281 aa
AA seq
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MKYFGAHVSASGGVENAPLNAHTIGATAFALFTKNQRQWTAAPLSPKSIEAFGENCRTDH
YQPAQILPHDSYLINLGHPDEEGLRKSRTAFLDEMRRCEQLGLDRLNFHPGSHLGQITIE
ECLRRVAESINLTLAATRGVTAVIENTAGQGSNVGFAFEHLAAIIERVEDKSRVGVCIDT
CHAFAAGYDLGSEAACDRTFDELERVVGFGYLRGMHLNDAMKPLGSRVDRHQSLGEGTLG
MTVFRYIARDKRFDDMPLILETPDESRWPQEIALLKELAEG
NT seq
846 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacttcggagcacacgtcagcgcatcggggggcgtagaaaacgccccgctgaac
gcgcataccatcggggcgaccgctttcgcccttttcaccaagaaccagcgccagtggacg
gccgcgccgctcagtcccaaatcgatcgaagcgttcggcgagaactgccggacggatcat
taccaaccggcacagattctcccgcacgacagctacctgatcaacctggggcatccggac
gaagaggggctgcgcaaatcccgcaccgccttcctcgacgaaatgcggcggtgcgaacag
ctcggcctcgaccggctgaacttccacccgggcagccacctgggacaaatcacgatcgaa
gaatgcctccggcgggtcgccgaatcgatcaacctgacgctcgcggcgacgcggggcgtc
acggccgtgatcgaaaacacggccggtcagggaagcaacgtcggtttcgcattcgaacat
ctggccgccatcatcgaacgggtcgaagacaaaagccgggtgggcgtctgcatcgacacc
tgccacgccttcgccgccggatacgacctcggcagcgaggcggcctgcgaccggacgttc
gacgaactggagcgcgtcgtcggattcggctacctgcgggggatgcacctgaacgacgcg
atgaaaccgctcggaagccgcgtagaccggcaccagagcctcggcgaagggacgctgggc
atgacggtattccgttacatcgcccgcgacaagcgtttcgacgacatgccgctgatcctc
gaaacgcccgacgaatcccgttggccgcaggagatcgcgctgctgaaagagctggccgaa
ggataa
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