Alteromonas sp. Mac1: AV939_00070
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Entry
AV939_00070 CDS
T05687
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale03030
DNA replication
ale03410
Base excision repair
ale03420
Nucleotide excision repair
ale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV939_00070
03410 Base excision repair
AV939_00070
03420 Nucleotide excision repair
AV939_00070
03440 Homologous recombination
AV939_00070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ale03032
]
AV939_00070
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_00070
Enzymes [BR:
ale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV939_00070
DNA replication proteins [BR:
ale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
AV939_00070
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
AV939_00070
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV939_00070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
WH_GTF3C1_N
tRNA-synt_1
Motif
Other DBs
NCBI-ProteinID:
AMJ85126
LinkDB
All DBs
Position
complement(14857..17649)
Genome browser
AA seq
930 aa
AA seq
DB search
MTDSKKPPFILVDGSSYLFRAFHGLPPLTNSKGQDTGAIYGVVNMLKSLIRQYNPTHMAV
IFDAKGKTFRDDIYEEYKANRPPMPEELRSQIEPLHTIIKAMGLPVIVESGVEADDVIGT
LACRATEHGIDTLISTGDKDMAQLVNDNVTLINTMTNQIMDIEGVNTKFGIPPELVIDFL
ALKGDKVDNIPGVPGVGDKSAQALLNGIGGISAIYDNLDKIADLSFRGSKTMATKMQEYE
EQARLSYTLATIAIDLDLEYKIDELRPTAPDNQTLQSMFAEYEFKRWHTEISALIAGDGS
ESSKPTSVESGSDSSDTDEVLPESNIDKSGYEVVLDEATFEAWIEKLKAAPLIAVDTETT
SVNYMEAELVGVSFCIEPGAAAYVPVAHDYPDAPTQLSREYVLAALKPILESETIIKVGQ
HIKYDKNVLAHYDITLNGIGFDTMLESYVLNSTAQRHDMDSLALAYLGHKTIHFEEIAGK
GAKQLTFNQIGLEEAGPYAAEDADITMRLHQAIWAKLENEPKLKTLLVDVEVPVACVLSR
MEQQGVLIESQRLRQQSQDLATRIAELEKEVHEEAGEVFNLGSPKQLQHILFEKMSLPVI
KKTPKGAPSTSEEVLQELALEFPLPKKLMEYRGLTKLKNTYTDKLPKMINHRTGRVHTSY
HQAITATGRLSSTDPNLQNIPIRNEEGRKVRQAFVPREGYKIVAADYSQIELRIMAHLSG
DEGLLDAFAHGRDIHKATAAEVFGVTLDEVTTEQRRSAKAINFGLIYGMSAFGLAKQLNI
PRHEAQKYMDLYFERYPGVLEYMDSTREGAKEKGYVETVFGRRLYLPDIKASNGARRKGA
ERAAINAPMQGTAADIIKMAMIKVDDWITSLESDNIIMMMQVHDELVFEIKEEHLEEQVK
NIVSLMEQAAVLNVPLVVEAGVGDNWDEAH
NT seq
2793 nt
NT seq
+upstream
nt +downstream
nt
atgacagattcgaaaaagcccccttttattctagtagatggatcatcttatctatttaga
gcatttcacggattaccacctctgacgaactcaaaaggtcaggataccggtgcgatctat
ggtgttgtcaacatgctgaaaagcttgattagacagtacaaccctactcacatggcagtc
atctttgatgccaaaggtaaaacgtttcgcgacgatatttatgaagaatataaagcgaat
cgcccacctatgccggaagagttacgtagtcaaatagaaccattacataccatcatcaaa
gccatggggttacctgtaatcgttgagtctggcgttgaagccgatgatgttataggtacc
ctagcctgtcgtgccacagagcacggtatcgatacgttgatcagtactggcgataaagac
atggcgcaactcgtcaacgacaatgtcaccttgatcaataccatgacgaatcagattatg
gatattgaaggggtaaacacgaaattcggtattccaccggaactggtaatcgacttctta
gcccttaagggtgacaaggtagataatattcctggcgtacccggtgtgggtgataaaagt
gcccaagcgctattaaacggtattggtggcatcagtgctatctatgacaatcttgataaa
attgccgatctctcatttagagggagcaagacgatggcaactaaaatgcaagagtatgaa
gaacaagctcgcttgtcatacacccttgccacgattgccattgatttagatctagaatac
aaaatagatgagcttcgccctactgctccggataaccaaaccttacagtcgatgtttgca
gagtatgaattcaagcgctggcataccgaaattagcgcattgatcgcaggtgatggtagt
gagtcctcaaagccaacaagtgttgagagcggatcagattcaagcgatacagatgaagta
ttaccagaaagtaatatcgataaatctggttatgaggtggtgttagatgaagctacgttt
gaggcttggattgaaaaactaaaagcagcaccgcttattgctgttgatactgaaacgacc
agtgttaactacatggaagctgaacttgttggtgtttctttttgtattgaacctggtgct
gcggcttacgtgccagttgctcatgattatcctgatgcacccacgcagttatcaagagag
tacgtgctagcagcattaaagcctattttagagtctgaaaccatcatcaaagtgggtcag
cacattaaatatgacaagaatgtactcgcccattacgacatcaccctaaatggtatcggc
tttgacactatgctggaaagctatgtgttaaacagcaccgcgcagcggcatgacatggac
tcgctagcccttgcctatttaggtcataaaacaattcactttgaagaaattgccggcaaa
ggcgctaaacagcttacgtttaaccaaattgggttagaagaagctggcccttatgctgcc
gaagatgctgatattactatgcgccttcatcaagcaatatgggcaaagctagagaacgaa
cccaaacttaaaacgttgttggttgatgttgaagtgccggttgcttgtgttttatctcgt
atggaacagcaaggtgtattaattgaaagccaacggttgcgccagcagagccaagactta
gctacgcgtattgctgagctagaaaaagaagtgcatgaagaagcaggcgaagtatttaat
ttaggttcaccaaaacagcttcaacacattttgtttgagaagatgtcgttaccggttatc
aagaaaacccccaagggtgccccttctacttctgaagaagtattacaagaacttgccctt
gaattcccgttacctaaaaagttaatggagtatagagggttaaccaagcttaagaatacg
tataccgacaaactccctaaaatgattaatcatcgcacgggtcgtgttcatacttcctac
catcaagctattacggcaacgggccggttgtcgtcaacggatcctaaccttcaaaacatt
cctattcgaaatgaagaaggccgtaaggtaagacaagcatttgttccacgtgaaggctat
aagattgtagctgccgattattctcaaattgaacttagaataatggcccatttgtcgggc
gatgaaggtcttcttgatgcatttgctcacggcagagacattcacaaagctaccgctgca
gaagtatttggggttacgcttgatgaagtgacaacggagcaacgtcgtagtgctaaggcc
ataaactttggtttgatttatggaatgagcgcctttggccttgccaaacaacttaatatt
ccacgtcacgaagcacaaaaatacatggacttatattttgagcgctaccctggcgtgctt
gagtacatggacagcactagagaaggcgctaaagaaaaaggttacgtggaaacagtgttt
ggtcgacgcttgtacctacccgacattaaagccagtaatggggcgcgccgtaaaggcgca
gaacgggcagcaattaatgcgccgatgcaaggcacagctgccgacatcattaaaatggcc
atgataaaggttgatgactggatcacctcacttgaaagcgacaatataatcatgatgatg
caggtacacgatgaattggtgtttgagattaaagaagaacatctagaggaacaggttaaa
aatatcgtcagcttgatggaacaagccgctgtattaaatgtgccgctggtggttgaagcg
ggcgtgggcgataactgggatgaagctcactaa
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