Alteromonas sp. Mac1: AV939_00520
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Entry
AV939_00520 CDS
T05687
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale00260
Glycine, serine and threonine metabolism
ale00460
Cyanoamino acid metabolism
ale00630
Glyoxylate and dicarboxylate metabolism
ale00670
One carbon pool by folate
ale00680
Methane metabolism
ale01100
Metabolic pathways
ale01110
Biosynthesis of secondary metabolites
ale01120
Microbial metabolism in diverse environments
ale01200
Carbon metabolism
ale01230
Biosynthesis of amino acids
ale01240
Biosynthesis of cofactors
ale04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
AV939_00520 (glyA)
09102 Energy metabolism
00680 Methane metabolism
AV939_00520 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
AV939_00520 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
AV939_00520 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
AV939_00520 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
AV939_00520 (glyA)
Enzymes [BR:
ale01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
AV939_00520 (glyA)
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Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-ProteinID:
AMJ85195
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Position
118920..120173
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AA seq
417 aa
AA seq
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MFCKDDQIAEYDNEVWQAVLEEEKRQQDHVELIASENYTSARVMQAQGTQLTNKYAEGYP
GKRYYGGCEHVDVVEQLAIDRAKALFSADYANVQPHSGSQANAAVFMALLEPGDTVLGMS
LAHGGHLTHGSKVSFSGKIYHSVQYGLNEATGEIDYDQVAALAHEHKPKMIIAGFSAYSR
VVDWQRFRDIADEVGAWFFVDMAHVAGLVAAGQYPNPVPIADVVTTTTHKTLRGPRGGLI
LSKHNEALEKKFNSAVFPGGQGGPLMHVIAAKAISFKEAMEADFVEYQQQVIDNARAMAD
VFKKRTYKVVSGGTDNHLFLLDLIDKSMTGKDADAALGKANITVNKNSVPNDPQSPFVTS
GLRIGTPAITTRGFGIQQVTDLTHWICDVLDDIHNEDMIATVRANVLALCEAHPVYR
NT seq
1254 nt
NT seq
+upstream
nt +downstream
nt
atgttttgcaaagatgatcagattgccgagtacgataatgaagtttggcaagctgtgctt
gaagaagaaaaacgccaacaggatcatgtggaactgattgcgtctgaaaattataccagc
gcccgggtgatgcaggcgcaaggcactcagctaacgaataaatatgctgaaggttaccct
ggtaaacgttactacggcggttgcgaacatgttgacgtagtagagcaattggctatcgat
agagcgaaagcgttgttttcagctgattacgcaaacgtgcaaccccattctggatcgcaa
gctaacgccgctgtatttatggcattgctcgagccaggcgatacggtattaggcatgagc
ttagcgcacggtgggcacctaacccacggttcaaaggttagcttttcaggcaaaatttat
cattctgtgcaatacggtttaaatgaagctactggcgaaatcgactacgaccaagtagcg
gcgttggcgcacgaacacaaacctaaaatgattatcgccggtttttcggcttattctcgc
gtagtagattggcagcgttttcgcgatattgccgatgaagttggcgcatggttcttcgtt
gatatggcccatgtggcaggcttagtagcggcggggcagtaccctaacccagtacccatt
gccgatgtggtcaccaccactacccataaaacccttcgcggccctcgtggtgggcttatt
ttgagcaaacacaatgaagctttagaaaagaaatttaactcggcggttttccctggcggc
caaggtggcccgctaatgcatgttattgcagccaaagccatttcgtttaaagaagcgatg
gaagcagactttgttgaataccaacagcaggttatcgacaacgcccgtgccatggccgat
gtatttaaaaaacgtacctataaagtggtgtcgggcggtaccgataaccatttatttttg
ctcgatttaattgataaaagcatgaccggtaaagatgctgatgccgcccttggtaaggca
aatattacggtaaataagaactcagtgcctaacgaccctcaatcaccttttgtgaccagc
gggctacgtataggtacgccagctatcaccactagagggtttggcattcaacaggtgact
gacctaacccattggatttgcgatgtgttagacgacattcacaacgaagacatgatagcc
accgtacgcgctaacgtgttggcgctgtgtgaagctcacccggtctatcgataa
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