Alteromonas sp. Mac1: AV939_00770
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Entry
AV939_00770 CDS
T05687
Name
(GenBank) LysR family transcriptional regulator
KO
K21699
LysR family transcriptional regulator, transcriptional activator for bauABCD operon
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ale03000
]
AV939_00770
Transcription factors [BR:
ale03000
]
Prokaryotic type
Helix-turn-helix
LysR family
AV939_00770
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Ortholog
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GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_5
HTH_20
HTH_11
HTH_36
Sec63
Motif
Other DBs
NCBI-ProteinID:
AMJ85235
LinkDB
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Position
complement(187995..188924)
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AA seq
309 aa
AA seq
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MRAILGNLSDTDIRLLRVFIVVAQAGGLSAAELELNIGRSTISRHLKDLETRLGMVLCHR
GRGGFSLTEEGKRIYESTQRLLLSLQDFRNEVNDMHRHLQGNVVVAMFDKTVSNDACKVN
EAIYTYQQQAPNVNVEIHVVPVNTIEQGILDGRYHIGIIPTHRSSSSLNYLPLFGEQMHL
YCGRKHPFYIELGDISREEICDAKYAGLSFHSPNMDKSMSLGLNKMAVANDQEGIATLIS
SGCYLGFLPDHYAESFVKKGQMRAIEPNNFAYHCEFAAIYRKSPKPTRLVELFLEALAKE
HGKEEPIAI
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgcaattcttggaaacctatcagatacagacattcgcttattgagagtattcata
gtggtggcacaggctggcggcctttctgctgccgagcttgaactcaatattgggcgttct
accattagccgacatttgaaagatttagaaacccgattaggtatggtgctttgtcatcga
ggccgtgggggcttttcgcttaccgaagaaggaaagcgtatttatgaatctacacagcgt
ttgttgttgtcgttgcaagactttagaaacgaagtaaacgacatgcatcggcatttgcag
ggcaatgtggtggtagccatgtttgataaaaccgtgtcgaacgatgcatgtaaagtgaat
gaagccatatacacctatcagcagcaggcgcctaatgtgaatgtagaaattcatgtggtg
ccggttaatacgattgagcaaggtatattggatgggcgctatcatattggcattattcct
acccatcgctcttcctcaagcctaaattacttacccttgtttggtgagcagatgcatttg
tattgcggacgcaagcaccctttttacatagaactaggggatatttcccgtgaagagatt
tgcgacgccaagtatgcggggctaagctttcacagcccaaatatggacaaaagtatgtct
ctggggcttaacaaaatggcggttgcgaacgatcaagaaggtattgccacactgatttct
tcgggctgttatttaggcttcttgcctgatcattatgcagagtctttcgtaaaaaaaggc
cagatgcgggctatcgagcccaataatttcgcctatcattgtgaattcgcggccatttat
cgtaagtcacctaagcccacccgcttggtagagctctttttagaagcgcttgccaaagaa
catgggaaggaagaacccattgctatttag
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