Alteromonas sp. Mac1: AV939_01155
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Entry
AV939_01155 CDS
T05687
Name
(GenBank) ABC-ATPase UvrA
KO
K03701
excinuclease ABC subunit A
Organism
ale
Alteromonas sp. Mac1
Pathway
ale03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AV939_01155
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_01155
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AV939_01155
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AV939_01155
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_29
AAA_16
AAA_23
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_25
nSTAND3
NACHT
AAA_21
Viral_helicase1
MMR_HSR1
ScfRs
Motif
Other DBs
NCBI-ProteinID:
AMJ85305
LinkDB
All DBs
Position
complement(273851..276685)
Genome browser
AA seq
944 aa
AA seq
DB search
MDKIEIRGARTHNLKNIDLTLPRDKLVVITGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSMMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLMFARVGTPRC
PDHDVPLDAQTVSQMVDKVLAMPEGSKLMLLAPIVKERKGEHLKTLQNLSAQGFIRARID
GDVCDLSDPPPLDLHKKHTIEVVVDRFKVRDDLALRLSESFETALALAGGNALVADMDNS
DAEEIVFSANFACPHCGYSISELEPRLFSFNNPAGACPTCDGLGTRQFFDPTRVVGNDEL
SLAGGAVRGWDKRSYYYFQMLQSVADHYEFDLTGPFGELDEKHKDIVLYGSKGKSLAFKY
INERGDVMERKHPFEGIIPNMERRYRETESNAVREELAKYLSQQHCSSCNGTRLRVEARN
VFIEDTTLPTIADKSIADAYEFFENLSLTGQKAQIAEKILKEILDRLRFLVNVGLNYLSL
SRSADTLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLRHLRDLGNT
VLVVEHDEDAIREADYIVDIGPGAGVHGGEIIAEGQLEDILASEDSLTGKYLSGREKIII
PEVRTPIKDDKWLELKGATGNNLKSVDLRVPMGVMTCVTGVSGSGKSTLINDTFYKIAHC
ELNKATTSEPAPYISMTGLDQLDKVVDIDQSPIGRTPRSNPATYAGIFTPIREIFAGTQE
ARSRGYKPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCQGKRYNRETLEVKY
KDKNIHEVLEMTVEDARDFFDPIPAIARKLQTLKEVGLAYIRLGQAATTLSGGEAQRVKL
AKELSKRDTGQTLYILDEPTTGLHFHDIKQLLAVLHRLRDHGNTVVVIEHNLDVVKTADW
IIDLGPEGGSGGGQIIAEGTPEVVAESKVSHTGRFLKPMLEAQA
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggataaaatcgagatacgcggtgctcgcacccacaatttgaaaaatatcgatttaaca
ctgccacgagacaagctggtagtgataactgggctgtcaggctcaggtaaatcgtcttta
gctttcgataccctatacgcagaaggtcaacgtcgttacgttgagtcgttgtctgcgtat
gcccgtcagtttttatctatgatggaaaaacctgatgttgaccatatagagggtttgtca
ccggctatatccattgagcaaaagtcaacgtcacacaaccctcgttcaaccgtgggtact
attaccgaaatttacgactaccttcgtttgatgtttgcccgtgttggcacgccacgatgc
ccagatcacgatgtgccgcttgatgcgcaaaccgtgagtcagatggtagacaaggtgctg
gcaatgccagaaggcagcaagttaatgctgctagcacctatcgtgaaagaacgtaaaggt
gaacatttaaaaactctgcagaatttgtctgcccagggttttattcgtgcgcgaatagac
ggcgatgtatgtgacttatccgatccaccgccattagatttacacaaaaagcatactatc
gaagtggtagtagaccgctttaaagtgcgcgatgacttagcgctgcgcttatcagaatct
tttgaaaccgcattagcgttagctggcggcaatgcgcttgtagccgacatggacaacagc
gatgctgaagaaattgtattttcagctaacttcgcgtgcccgcactgtggttacagtatt
agtgaattagagcctagattattctcgttcaataaccctgctggggcgtgcccaacctgt
gatggtttaggtacacgacagttcttcgacccaacacgtgtggtgggtaacgacgagtta
agccttgcaggcggcgcagtgcgtggctgggacaaacgcagttattattattttcagatg
ctgcaatcggttgccgatcattacgaattcgaccttactggccccttcggcgagctagat
gaaaaacacaaagacattgtgctgtatggctctaaaggtaagtcgttagcgtttaagtat
attaacgaacgcggcgatgtaatggagcgtaagcatccgtttgaaggcattattccaaat
atggagcgccgctatcgggaaaccgagtctaacgcggtacgtgaagaacttgctaaatac
ttaagccaacagcactgtagcagctgtaatggtacacgcttgcgcgtagaagcccgtaat
gtctttattgaagacactacactgcctaccattgcggataaatctattgccgatgcctac
gagtttttcgaaaacttatcgttaacaggccaaaaagcccaaatagcggagaaaattcta
aaagaaattctcgatcgtttacgcttcttggttaacgttggcttgaactacttatccctt
tcacgcagtgccgataccctctcgggcggtgaagcgcagcgtattcgcttggcgagccaa
attggtgctggattagtaggtgtaatgtacgttcttgatgagccttctattgggcttcac
caacgtgacaacgaacgcttattgaagacccttagacacttgcgtgatttgggtaacacg
gtattggtggtagagcacgacgaagacgccattcgtgaagccgattatattgtagatatt
ggccctggagccggtgtacatggcggtgaaattattgctgaaggtcagcttgaagatatt
ctagcaagtgaagactcacttactggaaaatacttatctggccgtgaaaaaattattatt
cctgaagttcgcacacctattaaagatgataaatggttggagctaaaaggggccacaggc
aacaacttgaagtcagtagacttgcgagtgcctatgggcgtgatgacctgcgtaaccggt
gtatctggttcaggcaaatctacccttattaatgacaccttttataaaatcgcccactgt
gaattaaacaaagctactacctctgagccagcgccttatatttcgatgacggggttagat
cagcttgataaggtggtcgatatcgaccagagccctattggtagaacaccgcgttcaaac
cctgcaacttacgccggaattttcacgcctattcgtgaaatattcgccggtacacaggaa
gcacgttctcgcggttataaaccaggtcgctttagctttaacgtgaaaggcggtcgctgt
gaagcgtgtcagggcgacggtgtaattaaagtagaaatgcacttcttacccgatgtatac
gtgccgtgtgacgtctgccaaggcaagcgctacaaccgcgaaaccttggaagtgaaatac
aaagacaagaacattcacgaagtgctagagatgacggtagaagatgctcgagatttcttc
gatcccattcctgccattgcccgtaaactgcaaacgctgaaagaagtaggcttggcttat
attcgtttgggccaagcagccactaccttatcgggcggtgaagcacagcgggtaaaatta
gccaaagaactgtcgaaacgtgataccggccaaaccctgtatattttggatgagcccacc
acagggctgcatttccacgatattaaacagttactagccgtactgcaccgactccgtgac
catggcaacacagtggtggttatcgaacacaatcttgatgtggtcaaaactgccgactgg
atcatcgacttaggccctgaaggtggctcaggcggtggtcaaattattgctgaaggtacg
ccagaagtagtggctgaatctaaggtttctcataccggccgattcttaaagccaatgctt
gaagcacaagcttaa
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