Alteromonas sp. Mac1: AV939_04355
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Entry
AV939_04355 CDS
T05687
Name
(GenBank) RNA degradosome polyphosphate kinase
KO
K00937
polyphosphate kinase [EC:
2.7.4.1
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale00190
Oxidative phosphorylation
ale03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09100 Metabolism
09102 Energy metabolism
00190 Oxidative phosphorylation
AV939_04355
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AV939_04355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ale03019
]
AV939_04355
Enzymes [BR:
ale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.4 Phosphotransferases with a phosphate group as acceptor
2.7.4.1 ATP-polyphosphate phosphotransferase
AV939_04355
Messenger RNA biogenesis [BR:
ale03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
AV939_04355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PP_kinase_C_1
PP_kinase_C
PP_kinase
PP_kinase_N
PLDc_2
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
AMJ85879
LinkDB
All DBs
Position
complement(1038139..1040220)
Genome browser
AA seq
693 aa
AA seq
DB search
MDNPELYYPKELSWLAFNERVLQEAADKNNPVVERIRFLGIYSNNLDEFYRVRAADVKRQ
ITIAQNDGNEEEAEKQTALMAIIQQKVVQLSDKFDHIHKDVLKALARYNIHILRKHELND
YQKQWVRNFFVNKVLRHIAPIIIDKKMDLLSRLNGTSVYLYVALRRKDRNTRYAVIQVPT
SDMSRFMLIPPEKSRKKKHIIMLDDMIQLCLEDIFRGFVKFDEVESFSFKMTRDAEYSIN
DEIDESYVEKMSESMKQRLIAEPVRVIYDNDMPEDMMQDLRKRLRITKLDTMHAAGHYRN
FKDFIGFPNVGREYLEHAPLPAIDSNAFSKFNTVFDAITAHDILLYYPYHRFLHVTEFVR
QAAFDPSVKVIRINIYRVASNSRIINSLIDAVDNGKKVTVVVELRARFDEEANIEWSKRM
TDAGIRVVLGVPTLKIHSKLCVITREERGAMINYAHFGTGNFNEKTAKIYTDYSLFTRNQ
ELANEAVAVFDLIQYPFRRYKFQHLQISPLNARTRIQSLIRQEIQHLKEGRPAQITFKIN
NLVDNELMDDLYRASQAGVKIRGIVRGMCSLIPGLRGISENIEIISIVDRFLEHPRVMVF
EGGGERKVFISSADWMTRNMDNRIEVGCPIYDKNLQQRIVDIMDIQFRDTLKARVIDKEQ
SNKYVARGNRKKLRSQIEIYDYLVKEEEKEAGK
NT seq
2082 nt
NT seq
+upstream
nt +downstream
nt
atggataacccagaattatattatcccaaagagcttagctggctagcatttaacgaaagg
gttttgcaggaagctgctgataagaacaaccctgttgtagaacgtattcggttcttaggt
atttactccaacaatcttgacgaattttatcgtgttcgtgctgctgacgtgaagcgccaa
attactattgcccaaaatgatggcaacgaagaagaagctgaaaaacaaacagcgttaatg
gctattatccagcaaaaagtagtacaactttccgacaagttcgaccatatccacaaagac
gtattgaaagcgcttgcacgttacaatattcacattttgcgaaagcatgaattaaatgac
tatcaaaagcagtgggtgcgcaatttctttgtaaataaggtgcttcgccatattgcccct
attattattgataagaagatggatttgttgagccgactaaatggcacatctgtctatttg
tatgtcgccctgcgccgtaaagaccgcaatactcgctatgcggttattcaggtgcctaca
tctgacatgtctcgctttatgcttattccgccggaaaaaagccgaaagaaaaaacatatt
attatgctggatgacatgattcagctttgcttagaagacatcttccgcggctttgtgaaa
ttcgacgaggtagagtcgttttcattcaagatgactcgagacgccgagtactctatcaat
gacgagattgatgaaagttatgttgagaaaatgtctgagagcatgaaacagcgcttaatt
gccgagcctgttcgggttatctatgataacgacatgcctgaagatatgatgcaggactta
cgcaagcgtttacgtataactaaactcgataccatgcatgctgcggggcactatcgtaac
tttaaagatttcattggttttccaaatgtgggccgcgaatacttagagcacgcaccacta
ccggcgattgacagcaatgccttttctaaattcaatacggtattcgatgccattaccgcc
cacgacattctgctgtactacccgtatcaccgatttctacatgttaccgaatttgtacgt
caagcggccttcgaccctagcgtaaaagttatccgcattaatatttatcgtgtggccagc
aactctcgtattatcaactcgctaattgatgcggtagataacggtaagaaagttaccgta
gtcgttgaacttcgggcccgttttgatgaagaggccaacattgagtggtcgaaacgtatg
actgatgcgggtattcgcgtggttctaggcgtgcccacattaaagattcactcgaagctt
tgcgtgatcacccgtgaagaacgtggtgcgatgattaactatgcgcatttcggcacaggg
aacttcaacgaaaaaaccgccaaaatctacaccgattacagcttatttacgcgaaaccaa
gagttagcaaatgaagcagtagccgtgttcgatttaattcaataccctttccgccggtat
aaattccagcatttgcagatttcccccttaaacgccagaacccgtattcagtcgcttatt
cgtcaagaaattcaacacttgaaagaaggccgccctgcgcaaatcaccttcaagattaat
aaccttgttgataatgaattgatggatgacttgtatcgtgccagccaagctggggtgaaa
attcgcggcattgtacgtggtatgtgttcgttaataccgggcttaagaggtattagcgaa
aacatcgagattatttctattgtcgataggttcttagagcaccctagggtgatggtattt
gaaggcggcggcgagaggaaagtgtttatttcatctgctgactggatgacccgtaacatg
gataatcgcattgaagtcggttgccctatatacgataaaaacctgcaacagcgcattgtc
gatattatggacatacaattccgtgatacgctaaaagcgagagtgattgacaaggaacaa
agcaacaagtacgttgcccgaggcaatcgtaaaaaattacgttcacagatagagatttac
gactatcttgtgaaagaagaagaaaaagaagcaggaaaatag
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