Alteromonas sp. Mac1: AV939_04695
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Entry
AV939_04695 CDS
T05687
Name
(GenBank) RNA helicase
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
ale03009
]
AV939_04695
Enzymes [BR:
ale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
AV939_04695
Ribosome biogenesis [BR:
ale03009
]
Prokaryotic type
rRNA helicases
AV939_04695
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
Helicase_C_2
AAA_19
Utp25_C
Motif
Other DBs
NCBI-ProteinID:
AMJ85940
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Position
complement(1126218..1127468)
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AA seq
416 aa
AA seq
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MTFEDLELDEELCHAVADMGYESPTSVQSLVIPHAMDGRDILASAPTGTGKTAAFLLPVC
QFLLDYPRKQPGSTRILILTPTRELALQVYEQAIELTKHTDIVSGVITGGINYGTDRETL
SQSIDILVATPGRLFEHIQNEMADCRDIECLILDEADRMLDMGFRTIVNQIASEARWRKQ
NMLFSATLEGGGVSQFANDILQNPEVIEAFPSRKEKNKIHQWYHLADDLNHKKALLVHIL
KEQATTTVVFVKTRERLQMLKDYLASQDIMVCWLQGEMPQDKRMAALTRFKSGEVPVLLA
TDVAARGIDVPEVSHVINFDMPRKADVYVHRIGRTGRAGAKGTAISLIEAHDFEFISKAA
RYTEEPIKARVIAELRPQNKAPKIGPRKKKLTAKDKAKAKSKAKPKNKTKVRTKKR
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgaagatctcgaattagacgaagaactctgccacgcggtggcggatatgggc
tacgagagccccaccagcgtacaatctttggttattcctcatgcaatggacggacgcgac
attttagcttctgcgcccacaggcacgggaaaaaccgctgcgttcttgttacctgtttgt
cagtttttactcgactacccgcgtaaacaaccaggttcaacccgcattcttattcttacc
cctacccgcgaacttgcgcttcaggtgtatgaacaagctattgagttaaccaagcacact
gacattgttagtggtgtgatcactggtggtattaactacggtaccgatagagaaaccctt
agccaaagcatcgatattttggtggcgaccccagggcgtctgttcgagcatattcaaaat
gaaatggccgattgccgtgacatcgagtgccttatactagatgaagccgaccgcatgcta
gatatgggttttcgcactattgtgaaccagattgcgagtgaagcccgctggcgcaaacag
aacatgctattttctgccacgttagaaggcggtggtgtaagtcagtttgctaacgacatt
ctgcaaaatcctgaagtgattgaagcgtttccgtcacgtaaagaaaagaacaaaattcac
cagtggtatcacttagctgatgacttgaaccataaaaaagcattgctcgttcatatatta
aaagaacaagcgactactacggttgtttttgttaaaacccgtgaacgcctacaaatgcta
aaagattacttagcatcgcaagatattatggtgtgctggttacaaggcgaaatgccacaa
gataaacgtatggcagccttaacgcgctttaaaagtggcgaagtgccagtattactggcc
accgatgtagctgcgcgaggcattgatgtacctgaagttagtcatgttattaacttcgat
atgccacgtaaagccgatgtctatgttcatcgaattggccgtaccggccgtgctggcgct
aaaggcactgcaatatcgctgatagaagcccacgactttgaatttatctccaaagccgca
cgctacaccgaagagcctatcaaagcacgcgtgattgcagaacttcgtccgcaaaataaa
gctcccaagattggcccaagaaagaaaaagctaacggccaaagacaaagcaaaagccaag
tctaaagcgaagccaaagaacaaaaccaaagtacgcactaaaaagcgctaa
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