Alteromonas sp. Mac1: AV939_05410
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Entry
AV939_05410 CDS
T05687
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K06876
(6-4)DNA photolyase [EC:
4.1.99.13
]
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_05410
Enzymes [BR:
ale01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.13 (6-4)DNA photolyase
AV939_05410
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
Direct repair
AV939_05410
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DPRP
RUBY_RBDX
Motif
Other DBs
NCBI-ProteinID:
AMJ86067
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All DBs
Position
1318239..1319777
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AA seq
512 aa
AA seq
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MASLILILGDQLTHNLPVLENATKTKDTVLMAEVREEATYVKHHKKKIVFLFSAMRHFAK
ALKEDNFNVSYIEYNDETNQGSLLEQVKHALAHGEYDRVKVTSPGEYRLLKSMQQWEQTL
GVPVCIINDSRFLASPQEFSDWANDRKQLRMEFFYREMRRKHGILMEDKNPIGGKWNYDS
QNREPMPAGTNVPTHTQFKIDAITQDVIDLVENEFGDHFGDISPFHFAVTRDDALTVLND
FIEERLPHFGQYQDAMVEGKPWLYHSHIAFYLNCGLLSPKEAISAAESAYYAGTAPLNSV
EGFIRQILGWREFVRGFYWHFMPGLKSDNYFNNDRSLPDFFWDGQTNMNCMRQCIKETQA
NAYAHHIQRLMVLGNFCLLTGLSPDEVQQWYLLVYADAYEWVELPNVAGMILYSDGGQLA
SKPYVASGSYINKMSNYCKNCGYQVSKKTGPKACPFNYLYWHFIDKHKEKLSGNPRMAMM
YKTYGRMKDENIDAMKDSATLFLTKLSKNEEV
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atggcttctttaatacttattttaggtgaccagcttactcacaatttgcctgtactagaa
aacgcgacaaaaacgaaagacaccgtactgatggccgaagtgcgggaagaagctacctac
gttaagcatcataaaaagaaaattgtttttctttttagtgcaatgcggcatttcgcaaaa
gcattaaaggaagacaatttcaacgttagttatattgaatataacgatgaaacaaatcaa
ggtagtttgctagaacaggttaaacacgcgctagcacacggtgagtacgacagagtgaaa
gtgacatcgccgggtgaataccgcttgctaaaaagcatgcagcaatgggagcaaacctta
ggtgtaccggtctgtattatcaatgactctcgttttctagctagccctcaagaatttagt
gattgggcgaatgacagaaagcaattgcgtatggagtttttctatcgagagatgcgaaga
aagcatggcatcttaatggaagataaaaaccctattggtgggaaatggaattacgactct
caaaatcgtgagcccatgccagcaggtacaaatgtgccgacccacacacaattcaaaata
gatgcgattacccaagacgttattgatttagttgaaaacgagttcggtgatcattttggt
gacattagtccgtttcattttgccgttacccgtgacgatgcgcttacggtactaaacgat
tttattgaagaacgcttaccccattttggtcaataccaagatgccatggttgaaggtaag
ccgtggttgtatcattctcatatcgccttttatttaaactgtggtttgttaagtcctaaa
gaagccattagtgctgcggaatcggcttattacgcaggcacggcaccacttaactcggtt
gaaggttttatacgccaaatactggggtggcgagaatttgtgagggggttttattggcac
tttatgcctggccttaagagcgataattatttcaacaatgatcgttcactgcctgatttc
ttttgggatgggcaaaccaatatgaactgcatgcgtcaatgcataaaggaaactcaggca
aatgcgtatgctcaccacattcagcgattaatggtactaggcaacttttgtcttttaacc
ggattatcacccgatgaggttcagcagtggtacttgttggtttatgccgatgcatatgag
tgggtagaactgccaaatgtagcaggcatgattttatacagtgatggcggccagctcgcg
agtaagccttatgtcgcaagtggaagttacattaataaaatgtcgaactactgcaaaaac
tgcggatatcaagtaagtaaaaagactggcccgaaggcatgcccgtttaattacttatac
tggcatttcattgataagcacaaagaaaaattaagcggcaacccaagaatggctatgatg
tataaaacctatggtcgaatgaaagatgaaaacatcgatgcgatgaaagacagtgcgacc
ctctttttaaccaaattatccaaaaatgaagaagtctga
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