Alteromonas sp. Mac1: AV939_06480
Help
Entry
AV939_06480 CDS
T05687
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ale03032
]
AV939_06480
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_06480
Enzymes [BR:
ale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AV939_06480
DNA replication proteins [BR:
ale03032
]
Prokaryotic type
DNA Topoisomerases
AV939_06480
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AV939_06480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
SH3b_T
Motif
Other DBs
NCBI-ProteinID:
AMJ86263
LinkDB
All DBs
Position
complement(1544603..1545637)
Genome browser
AA seq
344 aa
AA seq
DB search
MTIGQIVDGGTPHPHLTIKRIPCGKGAYYRYTSGRKVAGQRVLRRIKSLAIPPNWKSVTI
SRDPKASIQAIGLDAKGRKQYLYHPDWHKQQQAEKFKRLTVFGQKVPEFREYCRTLVNGE
QWTIERASALVCLLLDYTGVRIGNPQYSKENKTYGLTTLRRKHVQEATVEKVSLEYSGKH
SKRRTITIDDPLLASLVCECTQLQGYSLFRYQLADGSWCDIHSEDVNAFIHEHLGDNFSC
KDFRTWAASRFALQSFPDVDRYLREGRNRKWPNSLSSHVSKMLGNTPSVCRQYYIHPKLY
SVFNEKSTFENLLKTLAQGNEQLCDPIERDLSTEKLLLSIISSE
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
gtgactatagggcaaatcgttgatgggggtacgcctcatccgcacctaacaattaagcgc
attccttgcggcaaaggtgcctattatcgatataccagcggtcgaaaggtagcaggccag
cgtgtgctgcgtagaatcaaatcacttgccattcctcctaactggaaaagcgtcaccatt
agtcgtgaccctaaggcaagtattcaagccattggcctcgatgctaaagggcgaaaacaa
tacctttatcatccagattggcataaacagcaacaggcggaaaaattcaaacgtttgaca
gtattcggtcagaaagtacctgaatttcgagaatattgcagaacactcgtcaatggcgag
cagtggacaatagaacgggcatcagccttggtgtgcctgttattagattacactggcgta
aggataggcaaccctcagtacagcaaagaaaataaaacctacggcttaactacacttcgc
cgcaaacatgttcaagaagcaacggtagaaaaagtgtctcttgaatattctggtaaacac
agtaagcgacgcaccattacaattgacgatcccttattagcctcgttagtgtgtgaatgc
actcagcttcagggttacagcttatttcggtatcagctagccgacggctcgtggtgtgat
atccatagtgaagatgtaaatgcattcattcacgagcatttaggcgacaattttagctgc
aaagattttcgaacttgggcagctagtcgttttgcgctgcaaagcttcccagacgtagac
aggtacttgcgagaaggacgtaaccgtaagtggccaaactcgttgagttcacatgtgtct
aaaatgctaggaaatactccttctgtttgcaggcagtattacattcacccgaagttatat
tctgtgtttaacgagaaaagtacgttcgaaaacttgttgaagaccctagcgcagggcaat
gagcaactttgcgatcccattgagcgagatttaagcactgaaaagcttttgttgtcgatt
atttcatctgagtga
DBGET
integrated database retrieval system
