Alteromonas sp. Mac1: AV939_06875
Help
Entry
AV939_06875 CDS
T05687
Name
(GenBank) LacI family transcriptional regulator
KO
K02525
LacI family transcriptional regulator, kdg operon repressor
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ale03000
]
AV939_06875
Transcription factors [BR:
ale03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV939_06875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
LacI
Peripla_BP_4
HTH_3
HTH_IclR
HTH_19
HTH_26
HTH_10
HTH_31
Motif
Other DBs
NCBI-ProteinID:
AMJ86334
LinkDB
All DBs
Position
1628003..1629022
Genome browser
AA seq
339 aa
AA seq
DB search
MNKSKVRLIDVAEKAGVSKSTASQFLNGRFDFMSFDTRLRLQKAVEELNYVPNNIARSLK
TNKTKTLGVIVRDIASYYTSQTIRGMDDYCKSHGYDLFIYNSDFEPKTEKNALTTLCQLN
VDGAIIASCGNNAKLIEDISNNTMPMVQFQLEHDDCDTGIVVADYKRASFDATEYLINLG
HKHICFVTQKFESVKSRQEKYQGFVDAHTKHNIPVDEALTIHWSRQEGLHRSPIEMLKSD
NPPTAFFTQQIAITIDVLKELEAASIPIPQDVSLLGFEEIPMAEFFKVPITVIKQQPYEL
GGEAARMLMNKINNPKSVNTRMLVPCSLVERSSCSAPKA
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaataagagtaaagttagactgattgatgtggctgagaaagccggcgtatctaaaagt
accgcgtcgcaatttttgaacggccgctttgattttatgtcgttcgacacccgtttacgg
ttacaaaaagcggtagaggaactaaattacgttcctaacaatattgctcgtagcctgaaa
accaataagaccaaaacccttggtgttatcgttagagacattgctagctattacaccagc
caaactatacgcggtatggacgattactgtaaaagtcatggctacgacttgttcatttat
aattcggactttgaaccaaaaactgaaaaaaacgcgctgactacgctgtgtcagttaaac
gtagacggcgcaattattgcctcttgcggtaacaacgcaaagctaatagaagacatttca
aacaacaccatgccgatggtgcagtttcagttagaacatgacgactgtgacacaggcatt
gtggtcgctgattacaaacgtgcctcttttgatgccactgaataccttattaacttgggc
cacaaacatatctgttttgtaacccagaaattcgaatcggttaagtctcgccaagagaaa
taccaggggtttgtagatgcacatacaaaacataatattcccgttgatgaagccctgact
attcattggagtcggcaagaaggtttgcatcgctcccctattgagatgctaaaatcagac
aatccacccaccgctttctttactcagcaaattgcaataaccattgatgtattaaaagaa
ttagaagcggctagcattcctattccgcaagatgtttctttacttgggtttgaggaaatt
cctatggctgaattttttaaggtgcctattaccgtaataaaacagcaaccttacgaatta
ggcggcgaagcagcgcgcatgttaatgaataaaatcaacaacccaaaatcggtaaatacc
cgcatgctggtgccctgctcattggtcgagcgttcatcttgctcagcgcccaaggcttag
DBGET
integrated database retrieval system
