Alteromonas sp. Mac1: AV939_08825
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Entry
AV939_08825 CDS
T05687
Symbol
ruvB
Name
(GenBank) ATP-dependent DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AV939_08825 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_08825 (ruvB)
Enzymes [BR:
ale01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AV939_08825 (ruvB)
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AV939_08825 (ruvB)
RecFOR pathway proteins
AV939_08825 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
AAA_22
AAA_14
AAA_3
AAA_16
RNA_helicase
Mg_chelatase
nSTAND3
NTPase_1
AAA_2
Rad17
NB-ARC
AAA_18
AAA_17
Bac_DnaA
ABC_tran
TIP49
AAA_24
NPHP3_N
AAA_28
Sigma54_activ_2
ATP-synt_ab
AAA_PrkA
TsaE
Motif
Other DBs
NCBI-ProteinID:
AMJ86670
LinkDB
All DBs
Position
complement(2071306..2072310)
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AA seq
334 aa
AA seq
DB search
MIEADRLITPDASTEDEVIDRAIRPKMLDDYTGQPHVCEQMEIFIQAARKRDDALDHLLI
FGPPGLGKTTLANIVANEMDVSIKTTSGPVLEKAGDLAALLTNLERNDVLFIDEIHRLSP
VVEEILYPAMEDYQLDIMIGEGPAARSIKLDLPPFTLVGATTRAGSLTSPLRDRFGIVQR
LEFYSVKDLTTIVARSASYLNLDMSPEGAQEIARRSRGTPRIANRLLRRVRDYAEIKSDG
TVGVETAAKALDMLDVDKEGFDYMDRKLLCAIIEKFDGGPVGLDNLAAAIGEEKETIEDV
IEPFLIQQGFLQRTPRGRIVSQRAYLHFGFTPSV
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgatagaagctgatagactgattacgcccgatgcgagtaccgaagatgaagttatcgac
cgtgctattcgccccaaaatgcttgatgattatacaggccagccccacgtgtgtgagcag
atggaaatcttcattcaggctgctagaaagcgtgacgatgccctcgatcatttacttata
tttggtccgcctggcttgggtaaaactaccctagcaaatatcgtggcgaacgagatggat
gtaagtataaaaaccacctcggggccggtacttgaaaaagccggagacctagccgcactg
cttactaaccttgagcgcaacgatgttctttttattgatgaaattcatcgcttaagccct
gttgtagaagaaattctgtatccggccatggaagactatcaattagatatcatgataggc
gaagggccagccgctcgttctattaagctagacttgccacctttcaccttagtcggggct
acaacccgtgcaggttcgcttacatcgccattgcgagaccgttttggcatagttcaacgc
ctagagttttattcggttaaagatctcactaccattgttgctcgcagtgcgagttacttg
aatttagatatgagcccagaaggggcacaagaaattgcacgtcgctctagaggtacaccg
cgtattgccaacaggctattaagaagagttcgagattacgctgaaattaaatctgatggt
acggttggcgttgaaaccgctgcaaaggcattggatatgctagatgtagataaagaaggc
ttcgattatatggatcggaaattgctttgtgccatcatagagaaatttgatggtggtcca
gtagggctagacaacttagcagcagcaattggtgaagagaaagaaaccattgaagatgtg
attgaaccctttcttattcagcaaggtttcttacagcgcactccgcgtggacgtatcgtc
tcgcaacgtgcctatcttcattttggctttaccccttcagtttag
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