KEGG   Alteromonas sp. Mac1: AV939_09025
Entry
AV939_09025       CDS       T05687                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
ale  Alteromonas sp. Mac1
Pathway
ale02024  Quorum sensing
ale03060  Protein export
ale03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:ale00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    AV939_09025
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    AV939_09025
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    AV939_09025
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:ale02044]
    AV939_09025
Enzymes [BR:ale01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     AV939_09025
Secretion system [BR:ale02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   AV939_09025
  Eukaryotic Sec-SRP protein
   AV939_09025
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N Zeta_toxin CbiA cobW AAA_22 KTI12 AAA_33 APS_kinase VirC1 AAA_30 SLFN-g3_helicase YqeC AAA_31 T2SSE AAA_14 AAA_24 DnaB_C Thymidylate_kin AAA_16 AAA_19 ArsA_ATPase DO-GTPase1 TsaE nSTAND3 ABC_tran ResIII Rad17 FliD_C AAA_5 AAA_28 6PF2K KAP_NTPase AAA
Other DBs
NCBI-ProteinID: AMJ86704
LinkDB
Position
complement(2118547..2119974)
AA seq 475 aa
MFENLSERLGQTLRNVSGKGRLTEDNIKETLREVRMALLEADVALPVIKSFVAQVKERAV
GTEVTKSLKPGQIFIKIVQSELEAVMGEANEKLNLATQPPAVILMAGLQGAGKTTSVAKL
AKYLTEREKKKVMVVSADVYRPAAIKQLETLASEVNVSFHPSTILQTPIHIVEGAINEAK
KNFFDVLLVDTAGRLHVDNDMMDEIKDLHAAVKPIETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKADGDARGGAALSVRHITGKPIKFIGMGEKVDALEPFHPERIASRILGMGDV
LSLIEEVERKVDRNKAEQLAKKVQKGKGFDLQDFKDQLEQMKNMGGMMGMMDKLPGMGGM
SEKIKEQANDKQFNQMEAIINSMTPAERSRPDIIKGSRKRRIAAGSGTQIQDVNRLLKQF
TQMQKMMKKMSGGGMKKMMRQMKGMMPPGGPGGPGGFGGGGPGGFGGGGGMFPPR
NT seq 1428 nt   +upstreamnt  +downstreamnt
atgtttgaaaatttatcagaacgcttaggccagacattacgaaatgtcagtggtaagggg
cgtcttacagaagacaacatcaaagaaacgcttcgcgaagtgcgcatggcgttacttgaa
gcggatgttgcattaccggttatcaaatccttcgttgcacaagttaaagaacgtgcagta
gggactgaagtcactaagagcctgaagcctgggcaaatctttattaagattgttcagtct
gagctagaagcggtaatgggtgaagcgaacgaaaagctaaaccttgccactcagcctcct
gcagttattttaatggcaggccttcaaggggcgggtaaaaccacctcagtggctaaactt
gctaaatatctaaccgagcgtgaaaagaaaaaggttatggtagtaagtgccgatgtttat
cgcccagcggcgatcaaacaattggaaacccttgctagtgaagtgaatgtatcttttcac
ccgtcaactattttgcaaacgcctattcacattgttgaaggcgccattaatgaagcgaag
aaaaacttctttgatgtactgctagttgataccgcaggtcgtttgcatgtcgataatgac
atgatggacgagattaaagacttacacgctgctgttaagccaattgaaaccttgttcgtg
gttgatgccatgacagggcaagatgcggcaaatacagcaaaagcctttaacgatgcacta
ccattaaccggtgtaatcttaacgaaagccgatggtgatgcgcgaggcggtgctgccctt
tctgttcgtcatattacaggtaaacctattaagtttatcggtatgggcgagaaagtagat
gcactagagccattccacccagagcgtatcgcttcacgtattttaggtatgggtgatgta
ctcagcttaattgaagaagtagaacgtaaagttgaccgtaacaaagcggaacaactggcc
aagaaagttcaaaaaggtaaaggcttcgatcttcaagattttaaagatcagcttgagcaa
atgaagaacatgggcggcatgatgggaatgatggacaaactgccgggtatgggcggtatg
tctgaaaaaatcaaagagcaagccaacgacaagcagttcaatcagatggaagccatcatt
aactcgatgacacccgctgaacgctctcgccctgatatcatcaaagggtctcgtaaacgt
cgtattgctgcaggttctggtactcagattcaggatgtgaaccgtttacttaagcagttt
actcaaatgcaaaaaatgatgaagaaaatgtctggtggcggcatgaagaaaatgatgcgc
cagatgaaaggcatgatgcctcctggtgggccgggcggtccaggtggctttggtggtggg
ggccctggtggcttcggcggcggtggtggtatgttccctccaagatag

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