Alteromonas sp. Mac1: AV939_11170
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Entry
AV939_11170 CDS
T05687
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ale03016
]
AV939_11170
Enzymes [BR:
ale01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
AV939_11170
Transfer RNA biogenesis [BR:
ale03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AV939_11170
Prokaryotic type
AV939_11170
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
vATP-synt_AC39
Motif
Other DBs
NCBI-ProteinID:
AMJ87078
LinkDB
All DBs
Position
complement(2622399..2623373)
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AA seq
324 aa
AA seq
DB search
MARRRKGRDINGIVLLDKPLGGSSNQLLQKVRWLFKASKGGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTATLGIRTTTSDADGEVVEEKPVTVDEETVRNTCLQFLGKSKQ
VPSMFSALKHQGKPLYHYARQGITVEREARDIEIFELEVTRIALPEVDMRVKCSKGTYIR
SLVDDIGQILECGAYVTRLHRTEVADYPTDKMVSLDTLIATQEALDEGDFAALDAFMIPM
DTAVSRLPLVCINDAEKQRFDNGQSVKGTCSEALVVGQPYRVYFGENEQGLFLGVGEGVQ
DPKDQVGSNGDIFVNPKRRVVYNQ
NT seq
975 nt
NT seq
+upstream
nt +downstream
nt
atggcaaggcgtcgtaaaggccgtgatattaacggcatagtattgctagataagccatta
ggcggctcttcaaaccaacttcttcaaaaagtacgttggttgttcaaagcttcaaaaggt
ggtcatacaggcgcactagacccattagccagtggtatgttgcctttatgtttaggtgaa
gccactaagttttctcagtttctattagacgcagagaaaacctatgaagtgaccgcaacc
ttaggtattcgtactactacctctgatgcagatggtgaagtcgttgaagaaaagccggtg
acggtggatgaagaaacggttcgaaacacgtgtttgcaattcttagggaagagcaaacaa
gtgccttccatgttttcggcgctaaaacaccaaggtaagcctctttatcactatgctcgt
caggggataacagttgagcgtgaagccagagacatcgaaatatttgaacttgaagtcacg
cgaattgcgttgccagaagtggatatgcgcgttaaatgcagcaaaggcacttatattcgc
tcgttagtagacgatattggtcaaatccttgagtgcggcgcttacgtcacacgattgcac
cgtactgaagtagccgattatccaacggataaaatggtatctcttgatacgctaattgct
actcaagaagcattagatgagggcgactttgccgcacttgatgcctttatgatacctatg
gacaccgcggtcagtagactgcctttggtctgcattaacgatgctgaaaaacagcgtttt
gataatggtcaaagtgttaaaggcacttgtagcgaagcattagttgtcggccagccttac
cgagtttattttggagaaaatgaacaaggtttgtttttaggtgtaggtgaaggcgttcaa
gatccaaaagaccaagtggggtctaatggcgatatttttgtgaatcccaaaagacgggtt
gtgtacaaccaataa
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