Alteromonas sp. Mac1: AV939_12195
Help
Entry
AV939_12195 CDS
T05687
Name
(GenBank) LacI family transcriptional regulator
KO
K05499
LacI family transcriptional regulator, repressor for deo operon, udp, cdd, tsx, nupC, and nupG
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ale03000
]
AV939_12195
Transcription factors [BR:
ale03000
]
Prokaryotic type
Helix-turn-helix
LacI family
AV939_12195
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peripla_BP_3
Peripla_BP_1
Peripla_BP_4
LacI
HTH_3
HTH_41
TetR_N
Motif
Other DBs
NCBI-ProteinID:
AMJ87261
LinkDB
All DBs
Position
2859998..2860993
Genome browser
AA seq
331 aa
AA seq
DB search
MATIRDVAREAGLSTGTISKALSNPDKISKKNLAKVQSAIAKLNYKPNMLAQKFRSKRSN
TIVVMVPDIANLFFANVISGVETVAQAAGFSVLLGDTKDSVAREKQFINMVETRLADGLI
NLRPYRPNDALLPKEDVLSVAASSCENTPSYSVRIDNVGAMHKVVSYLLSQGHKRIGVIT
GLKENPHTIDRLNGYKKALEEADIEYDQAIVIEGDFNYWSGLSAAEQFCKMDNRPTAICS
FNDEMAIAAIKGFNDKGLKIPQDISVTGFDDMEVSKYAIPTLTTVSQPAAKIGERSAELL
FSLIKGEPPALVEHILPYEFIIRESTAPPKK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgactataagggacgtagctcgagaagctgggctatcgacaggaactatttcaaaa
gcattgagcaatccagataaaatctcaaaaaaaaatctggctaaggtacaaagcgcgata
gctaaacttaactataaacctaatatgttagcgcagaagttcagaagcaaacgttccaat
acaatagttgtaatggttcctgatatcgccaacttgtttttcgctaacgttattagtggg
gtggaaactgtggcacaggccgcaggttttagtgttttacttggcgatactaaagactcc
gttgcacgtgaaaaacagtttatcaacatggtggaaactagattagccgatggcttaatt
aaccttcgtccatatcgaccaaatgacgcgctcctaccgaaagaagatgtactatctgtt
gcagcaagtagctgtgaaaatacaccgtcctactcagtaagaattgataacgtgggagcg
atgcacaaggtcgtaagttaccttttgtcacaaggacataaacggatcggcgtcataact
ggtcttaaagaaaatcctcataccattgaccgtttgaatggatacaaaaaagcacttgag
gaagctgatatagaatacgaccaggcgattgttattgaaggagattttaactattggtct
gggctcagcgcagccgagcaattttgtaagatggataatcggcctacagctatttgctca
tttaatgacgaaatggcaatagccgcaattaaaggcttcaatgacaaaggcttaaaaatt
cctcaagacatctctgttactggttttgatgatatggaagtttcaaaatacgctatccca
acattgaccactgtttcgcaacctgcagcaaaaataggcgaacgatcagctgaattgctt
ttttcgttgataaaaggcgagccccctgcgttggttgaacatattctcccttacgaattc
atcattagagaaagcacagcacctccgaaaaagtaa
DBGET
integrated database retrieval system
