Alteromonas sp. Mac1: AV939_12885
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Entry
AV939_12885 CDS
T05687
Name
(GenBank) hypothetical protein
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale03030
DNA replication
ale03430
Mismatch repair
ale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV939_12885
03430 Mismatch repair
AV939_12885
03440 Homologous recombination
AV939_12885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ale03032
]
AV939_12885
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_12885
Enzymes [BR:
ale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV939_12885
DNA replication proteins [BR:
ale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV939_12885
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV939_12885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
DNA_pol3_tau_5
AAA
AAA_14
AAA_5
RuvB_N
AAA_22
AAA_2
AAA_18
Rad17
ResIII
AAA_16
AAA_assoc_2
AAA_19
AAA_7
nSTAND3
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AMJ87389
LinkDB
All DBs
Position
complement(3018726..3021596)
Genome browser
AA seq
956 aa
AA seq
DB search
MSYQVLARKWRPGKFSELVGQEHVVSAISNALDNDRLHHAYLFTGTRGVGKTTIARIFSK
SLNCEEGQGSNPCGQCNTCKEIEQGNYVDLLEIDAASRTKVEDTRELLDNVQYKPTRGRY
KVYLIDEVHMLSKHSFNALLKTLEEPPPHVKFLLATTDPQKLPITILSRCLQFNLKALSR
EQIVGQLNHILEQETLPFEPQALALLARAAQGSMRDALSLTDQAIAQGGNAVNASVVTDM
LGLMDKNQLVKLLHAVVSKTPADVMQLVQDMSEQAPDYDHVLAELGSTLHQIALTQWVPE
ACKLETTSAKAIYQLAKSISAEQVQLLYQIALQGRKDLPFSSDGRSALEMTLMRMMTFAP
STPLADAPSEIANGTVDSALPIASAEKKTLISEPETQSTTSTASALGAKSADSFENTQSQ
FHKESTNAGSSTAGEEVPSNEQDAQSANVLDAVTATDETDHAQTDDISSSSDVAGLTASQ
IIPSEQETSVYEKEVHDEVASQSVASFEQTEQSQQLAHPKDGQPSGASQPAANNQSSVDD
LPSSDELPSKEDSQQPQSLLSEHTPSDSAPFNDMPPADAYMDDMPPPYDDDGESSFMPPD
FADAQLSNAPLLDEGPDFQSTPKPTPEAQLTSTADMLALRQRLKQKRDESAEQAAKKPEA
ANETTSFVDRMSKASSQGSLAASSEGQGDEQFKGAADESNARQETTTAKATAPSSSDNLN
TNSSAGLDAGSNTTSNASSQSETDMPPWDTGVHHNNEPFVTSEHDTRFEPPMTDVAQYGG
NSETARNEPQPLEPEPSDTRNEFSAEPVNQFTSQYQGKLAAYLDDGSKLVHASQIDKWSN
DVEQMPIAGLLKQLVLHASFLRNDQGITLEIDNSQAHLLKDSAKQQLLDVLHHSFGEGEN
INITLGSPNLTPYALQQDIIAMRQAHAQSVVHTDETIQALLSAFDASIVTDSVKAR
NT seq
2871 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggtattagcacgtaaatggcgcccgggtaagtttagtgaactcgtaggg
caggaacatgttgtttcagctatttcgaatgcgttagataacgaccgcttgcaccacgcg
tacctatttacaggtacgcgaggggtaggtaaaaccaccattgctcgtatattttccaaa
agtttaaactgcgaagaggggcaggggtctaacccttgtggtcaatgtaatacctgtaaa
gaaattgagcagggtaattatgttgatttgcttgaaattgatgcggcatcacgcacaaag
gtagaagatacccgagagttgcttgataacgttcaatacaagcctacccgcggccggtat
aaggtgtaccttattgatgaagtacacatgctttctaagcacagctttaacgcgttgcta
aaaacgctagaagagccaccgcctcacgttaagtttttactggctactaccgatccacaa
aagctccctattactattttatcccgatgcttacagtttaatttaaaagcattgtcgcga
gagcaaatagtagggcagcttaatcatattctagagcaagaaaccttaccctttgagccg
caagcgctagcgttgttagcccgcgctgcacaggggagcatgcgtgatgccttaagctta
accgaccaagccattgcacaaggtggtaatgcggttaacgcttcagtggtcaccgacatg
cttgggttgatggataaaaaccagcttgtgaagttattgcatgcggtggtaagtaaaacg
ccagccgatgtcatgcaattggttcaggatatgtcggaacaagcacctgattacgatcat
gtgcttgcagagctaggcagcacactacatcaaatagcgctaacccaatgggtgcctgaa
gcctgtaaattggaaacgacttcagccaaagctatttaccaacttgctaaatcaatttct
gctgaacaagtgcaattgttatatcaaattgcgctgcaaggaagaaaggacttacctttc
tcatcagatggcaggagcgcattagaaatgacgctaatgcgtatgatgacatttgcacct
agcacccctttagctgatgcgccctctgaaatagccaatggtacggttgacagtgcgttg
cctattgcatcggcggaaaaaaaaacactaatttctgagccagaaacgcaaagtacgact
tctaccgctagcgctcttggtgctaaaagtgcggatagctttgaaaacacccaaagccaa
tttcataaagaaagtacaaacgctgggtcatcgacagccggtgaagaggttcccagcaat
gaacaagatgctcaaagcgctaatgttttagatgcagtaactgcaactgatgaaaccgac
cacgcgcaaactgatgacatttcctcttcttctgacgtagcaggtttaaccgcttcgcag
attattccctctgaacaagaaacctcggtttatgaaaaagaggtgcatgacgaagtcgct
tcccaatcggtagcatcttttgaacagacagagcagtcgcagcagttagcgcatccgaaa
gatggccagccttcaggtgcctctcagcctgcagcaaataatcaatcttcagtagatgat
ctgccttcaagtgatgagctaccttcaaaagaagatagccagcaaccccaaagtttgtta
tcagagcatacaccttcagattcggcaccgtttaatgacatgccgcctgctgatgcttac
atggacgatatgccaccgccttacgatgatgatggtgagtcgtcatttatgccgcctgat
tttgccgatgctcagctttcaaatgcaccgctattagatgaaggtcctgattttcaatct
acgcctaagcccacgccagaggcacagctgacatccaccgctgatatgctcgcgctacga
cagcgattaaagcaaaagcgtgatgaaagcgcagaacaagctgcgaaaaagcctgaagcg
gcgaacgaaactactagttttgtagatagaatgagtaaggcttccagccaaggctcactt
gccgcttctagtgaaggacaaggtgatgaacaatttaaaggcgcggctgatgagagcaac
gctcgccaagaaacaactactgcaaaggcaactgcgccatctagctctgataatttaaat
acaaattcaagtgcaggtttagatgctggctctaatacgacttctaacgctagctcgcaa
agcgaaaccgatatgcccccgtgggataccggtgtgcaccataataacgagccgtttgtt
accagtgagcacgatacccgttttgaaccaccaatgactgacgtggcgcagtatggcggc
aatagcgaaacagctcgtaatgaaccacagcctttagaaccagagccaagtgatacccgt
aatgaatttagcgctgaaccagtaaatcagttcacaagtcagtatcaaggtaagctcgcc
gcttatctggatgatggtagtaagcttgttcacgcgagccaaattgataagtggagcaat
gatgtagagcaaatgcctattgcaggcttgcttaaacaattggtgcttcatgcctctttt
ttgcgaaatgatcagggtataacgcttgaaattgataacagtcaggcgcatctattaaaa
gacagtgcaaaacaacagttgcttgatgtattgcatcatagttttggcgaaggggagaac
attaacatcacccttggttcgccaaatctaacgccttatgcgttgcaacaagacattatt
gctatgcgccaagcgcatgcacaatcggtggtacataccgatgaaacaatacaagcgttg
ttatcagcgttcgacgcatcaatagtgaccgactcggttaaagcgcggtag
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integrated database retrieval system
