Alteromonas sp. Mac1: AV939_13125
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Entry
AV939_13125 CDS
T05687
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_13125
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AV939_13125
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
ChlI
Lon_C
DnaB_C
SLFN-g3_helicase
RecA
AAA_14
AAA
AAA_22
GvpD_P-loop
ABC_tran
Viral_helicase1
AAA_24
Zeta_toxin
nSTAND3
Rad51
AAA_16
KdpD
cobW
NTPase_1
AAA_29
FtsK_SpoIIIE
DUF7125
DUF5906
Zn_ribbon_8
zf_UBZ
Motif
Other DBs
NCBI-ProteinID:
AMJ87430
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Position
complement(3072904..3074271)
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AA seq
455 aa
AA seq
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MAKRKTAYVCSDCGAEFPRWQGQCSECKAWNTISEFVVSSAKTNSKPTLSGYAGQTAAKI
EMLNAIDLESLPRFSAGFKELDRVLGGGIVPGAAMLIGGSPGAGKSTLLLQVMCQMAQTE
TALYVTGEESLQQVAMRAKRLNLPDDKLMMLAETSVETICELALTKKPKIMVIDSIQVMH
VADVQSAPGSVSQVRESAAYLTRFAKQHHISMFLVGHVTKDGNLAGPKVLEHCIDSSMML
EGESDGRYRTLRSHKNRFGAVNELGVFAMTEKGLKEVNNPSAIFLSRGENETPGSSVMVI
WEGTRPLLVEIQALVDYSQMSNPRRIAVGLDQNRLSMLLAVLHRHGNVQMNDQDVFVNVV
GGVKVSETSADLALLLAMVSSFRNRSLPKDLIVFGEVGLAGEIRPVPNGTERIIEAAKHG
FKRAIVPKANAPKQAVNGMKVIPVSQLSDALDALE
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaacgaaaaacggcttatgtatgctcagattgtggggctgaatttccacgctgg
caggggcagtgttctgaatgcaaagcttggaacaccattagcgagtttgtagtcagtagc
gccaaaaccaattcaaaaccaactttgtcaggttatgctgggcaaactgccgctaaaata
gaaatgctcaatgcgattgatttggaatctctaccccgatttagcgcagggtttaaagag
ctcgatagagtattgggcggtggaatagtgccaggtgctgctatgttaattggcggctcg
ccaggggcaggtaaaagtacattgttacttcaggttatgtgtcaaatggcacaaaccgaa
accgctttatacgtaacaggggaagagtcgcttcagcaagtggcgatgcgagcaaaacgc
ttaaatctacctgatgataagctaatgatgttggcagaaaccagtgtagaaactatttgc
gaactggcgttaaccaaaaaaccaaaaatcatggttatcgactctattcaagtaatgcat
gtggccgatgtgcaatctgcaccgggcagtgtatctcaagttagagaaagtgcagcttat
ctaacccgctttgcaaaacaacaccacatctcaatgtttcttgtaggtcatgtaaccaaa
gacggaaacttagctggcccgaaagtgttagagcactgtattgacagttcaatgatgcta
gaaggggaaagtgatggtcgttaccgtacgttacgcagccataaaaaccgttttggcgct
gtaaatgaattaggcgtttttgcgatgacagaaaaaggcctaaaagaggtaaataaccct
tcggcgattttcttaagccgaggcgaaaatgaaacgcctgggtcgagcgtaatggtaatt
tgggaaggcacgcggccgctgttggtagaaatacaggctttggtggactactcacaaatg
tctaaccctcggcgaattgcggtggggctagatcaaaatcgattgtcgatgttgttagcg
gtattgcatcgtcacggtaatgtacaaatgaacgaccaagacgtctttgtaaatgtggtt
ggtggtgtgaaggtaagtgaaaccagcgctgacttggcgttactgctagcaatggtatcg
agttttcgaaatcgctctctacccaaagatttaattgtgtttggagaagttgggctagcc
ggagaaattaggcctgttcctaatggcaccgagcgcattattgaagccgctaaacatggt
ttcaaacgtgcgattgtgccaaaggcaaatgcgccaaagcaggctgtaaatggtatgaaa
gttattccagtatctcagctcagcgatgcgttagacgcattagaataa
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