KEGG   Alteromonas sp. Mac1: AV939_13160
Entry
AV939_13160       CDS       T05687                                 
Symbol
rnc
Name
(GenBank) ribonuclease III
  KO
K03685  ribonuclease III [EC:3.1.26.3]
Organism
ale  Alteromonas sp. Mac1
Pathway
ale03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:ale00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    AV939_13160 (rnc)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:ale03019]
    AV939_13160 (rnc)
   03009 Ribosome biogenesis [BR:ale03009]
    AV939_13160 (rnc)
   03036 Chromosome and associated proteins [BR:ale03036]
    AV939_13160 (rnc)
Enzymes [BR:ale01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.26  Endoribonucleases producing 5'-phosphomonoesters
    3.1.26.3  ribonuclease III
     AV939_13160 (rnc)
Messenger RNA biogenesis [BR:ale03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     AV939_13160 (rnc)
Ribosome biogenesis [BR:ale03009]
 Eukaryotic type
  90S particles
   RNase
    AV939_13160 (rnc)
 Prokaryotic type
  rRNA processing factors
   AV939_13160 (rnc)
Chromosome and associated proteins [BR:ale03036]
 Eukaryotic type
  Gene silencing
   microRNA pathway
    Microprocessor complex
     AV939_13160 (rnc)
SSDB
Motif
Pfam: Ribonucleas_3_3 Ribonuclease_3 dsrm RM44_endonuclase DND1_DSRM
Other DBs
NCBI-ProteinID: AMJ87436
LinkDB
Position
complement(3081589..3082278)
AA seq 229 aa
MQGIDKYIRLSKALGYTFNNEALLEQALTHRSAAKQHNERLEFLGDAILGMVIGETLFKR
FPDVPEGKLTRMRSTLVKGDTLAELAREASMGELLHLGPGELKSGGHRRSSILADAVEAV
LGAIYLDSGMDEVCNVIYHLWESRIEALNPNAHPKDSKTRLQEYLQGRKLPLPSYEVISI
SGKDHAQIFEVSCTVTTLDKPVSASGNSRRKAEQEAARLTLETLDDTAK
NT seq 690 nt   +upstreamnt  +downstreamnt
atgcagggtattgataaatatattcgcttgagtaaagcgttagggtacacatttaataat
gaagccttgctagagcaagcgctgacccacagaagtgcagcaaagcagcacaatgaaaga
ttagagtttttaggtgatgctattttaggtatggtcataggtgaaaccttgtttaagcgt
ttccccgatgtgcctgaaggtaagcttacccgtatgcggtcaaccttagtaaaaggcgat
acgttggccgaattggcccgtgaagcgagcatgggtgaactacttcaccttggtcctggt
gaacttaaaagtggcggtcatcgtcgcagttcaatattggcagacgcagtagaagctgtg
ttaggcgcaatctacttggactcagggatggatgaggtctgtaatgttatataccattta
tgggaaagccgtattgaagcgttaaatcctaacgcgcaccctaaagacagtaaaacccgt
cttcaagagtacctgcaaggtcgtaagctaccattaccgtcttatgaagttatctctatc
tcagggaaagatcacgctcaaatttttgaagtgagctgcacagtgacaacgttagataag
cccgtttcggcttctggaaatagccgaagaaaagccgagcaggaagcagcaagacttacc
ttggagacactcgatgacacagccaaatga

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