Alteromonas sp. Mac1: AV939_13370
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Entry
AV939_13370 CDS
T05687
Name
(GenBank) DNA-binding protein HU
KO
K03530
DNA-binding protein HU-beta
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ale03032
]
AV939_13370
03036 Chromosome and associated proteins [BR:
ale03036
]
AV939_13370
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_13370
DNA replication proteins [BR:
ale03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AV939_13370
Chromosome and associated proteins [BR:
ale03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
AV939_13370
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
AV939_13370
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Ortholog
Paralog
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-DNA_bdg
HVO_A0261_N
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
AMJ87471
LinkDB
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Position
complement(3125624..3125896)
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AA seq
90 aa
AA seq
DB search
MNKSQLIDQIAAGADISKAAAGRALDAFTDSVTAALKDGDQVALVGFGTFSVRERSARSG
RNPQTGETIQISAAKVPSFKAGKALKDACN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
gtgaacaagtctcaacttatcgaccaaattgctgctggcgcagatatttcaaaagcagct
gccggccgcgctctagatgcattcactgactcagtaactgcagcacttaaagacggtgac
caagtggcactagtcggtttcggtactttctcagtacgtgagcgctctgctcgtagtggt
cgtaatccacaaactggtgagactattcagatttcagcggcgaaagttccttctttcaaa
gctggtaaagctctgaaagacgcttgtaactaa
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