Alteromonas sp. Mac1: AV939_15860
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Entry
AV939_15860 CDS
T05687
Name
(GenBank) hypothetical protein
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale00040
Pentose and glucuronate interconversions
ale01100
Metabolic pathways
ale02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
AV939_15860
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
AV939_15860
Enzymes [BR:
ale01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
AV939_15860
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GFIT
Motif
Pfam:
Pectate_lyase_4
RicinB_lectin_2
Ricin_B_lectin
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AMJ88929
LinkDB
All DBs
Position
complement(3715554..3717527)
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AA seq
657 aa
AA seq
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MSGAYGSGFHTQNGGATGGAGGDVVRVTTGKQIHEALCNRNTSETPIIIEVEGTINHGNT
EKVSGSSCNTAEDKIELKDISNVTLIGVGQGALFDELGIHIRNSTNIIIRNVHVRNVKKS
GSPTSNGGDAIGIETDVRNVWVDHVTLEASGGESEGYDGLFDVKDNSKYITLSYSHLLNS
GRGGLVGSSESQVNNGPLTYHHNIFENLNSRVPLVRGATAHIYNNHYDGIESSGINSRAG
AEVKVENNYFEDAKDVLGTFYTTTDGDWQVAGNIFGSGVTWSSSDDDYQPAGPNVVSTTS
VGIPYSYTLDNASCVRNILQQTAGANKNLQVSDGSCGTTGGGDNGGGDNGGGDNGGGDNG
GGDNGGGDNGDTPSGVNLSLSADADGSSKASGTSYGNVKDGDTSTYWSPNGSTGRVSIKG
LDTTINAVRIVERSGAEGRVTSWRLVNNDTGSIITSGNTIPDPITFSDVSLGKLNFVIDS
SSSTPQIAEFEIYFGLDSNGGGSSDGGSNVVNGTVNGIYRITPVHSGRSFDVANCGTTNG
SNIRQWEWLDNDCQKFTISQVDGIWHRISPLNALQQSLEISNNSTSAGENVQLWQYSGGN
NQLFRFQSAGSGKWRIVARNSELCLDIAGQGGGNGANIIQWTCIAQADNQMFELTRQ
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggtgcttatggctcgggctttcatacccaaaacgggggtgcgaccggtggcgca
ggaggtgatgtggtacgcgtaacaacgggcaaacagatacatgaggcactctgtaatcgg
aacaccagtgaaacaccgattatcatcgaagtagaaggcactataaatcacggtaatact
gaaaaagtgtcgggaagtagttgcaataccgcagaggataaaattgaattaaaagacatt
agtaacgtaacccttataggggtaggtcaaggtgccttgtttgatgaacttggaatacac
atacggaattctaccaacattattatacgaaatgttcacgttcgaaatgtgaaaaaatcg
ggttcaccaacatctaacggtggcgatgccatcggtattgaaaccgatgtgcgaaacgtg
tgggtagatcacgtaacattagaagcaagtggcggcgaaagcgagggttacgacgggtta
tttgatgtaaaggacaattcaaaatatatcacgctttcgtacagtcatttgctcaactct
ggtcgtgggggattagtaggttcaagcgaatcccaagtcaataatgggccattaacctat
caccataatatttttgagaatttaaactcgcgagtacctctagtgcgaggggccactgcg
catatttacaacaatcattacgacggtattgaatcgtcgggtatcaattcaagagcaggg
gctgaggttaaagttgagaataactattttgaagatgctaaagatgtgttgggaacgttt
tataccacgactgatggcgattggcaggtagccgggaacatttttggaagcggcgtaaca
tggagttcatctgacgatgactatcagccagccggtccgaacgtggtttctaccactagt
gttggcatcccgtattcttatactctcgataatgcctcatgcgtccgcaacatcttgcaa
caaacagctggcgcgaataaaaatttgcaagtatctgacggtagttgtggaactactggc
ggtggtgacaacggcggtggtgacaacggcggtggtgacaacggcggcggtgataacggc
ggcggtgataacggcggcggtgataacggcgatacgccttccggcgttaacctctctctc
tcggccgatgctgatggtagttcaaaagcaagtggtaccagttatggcaacgttaaagat
ggggataccagcacctattggtcacctaacggttcaaccggtcgcgttagtatcaaaggg
ttggacacaaccattaacgcagttcgaattgtagaaagaagtggtgctgaagggcgcgtt
acgtcttggagattggttaataacgacactggttcaatcattacatcaggtaacactatt
cctgatcccataacgttttcagatgtaagcttaggcaaacttaactttgtcattgattca
tcatcatcgacgcctcaaatagctgaattcgaaatttattttgggctagatagtaatgga
gggggcagtagtgatggaggttcaaatgttgtcaatggcacggtgaacggaatctataga
attacccctgtacatagcggacgaagttttgatgtagccaactgcggaactacaaatggt
tcaaatattcgccaatgggaatggttagacaatgattgtcaaaaatttaccatttcgcaa
gtggatggaatttggcaccgtatctcaccattaaacgcattgcagcagagtttagagata
tcaaataactcgacatctgcaggggagaacgttcaattgtggcaatatagtggaggcaat
aatcaactgttccgctttcaatctgccggttcgggtaagtggcgaattgtagcaagaaac
agcgagctatgccttgatatagctgggcagggcgggggtaatggtgccaatataattcag
tggacttgtattgctcaagcagacaatcaaatgtttgaattgactagacagtaa
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