Alteromonas sp. Mac1: AV939_17250
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Entry
AV939_17250 CDS
T05687
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
ale
Alteromonas sp. Mac1
Pathway
ale03030
DNA replication
ale03430
Mismatch repair
ale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV939_17250
03430 Mismatch repair
AV939_17250
03440 Homologous recombination
AV939_17250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ale03032
]
AV939_17250
03400 DNA repair and recombination proteins [BR:
ale03400
]
AV939_17250
Enzymes [BR:
ale01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV939_17250
DNA replication proteins [BR:
ale03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV939_17250
DNA repair and recombination proteins [BR:
ale03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV939_17250
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
AMJ88166
LinkDB
All DBs
Position
complement(4074145..4074828)
Genome browser
AA seq
227 aa
AA seq
DB search
MLQWLSDWLFGRGPSSFDRFKSATLQDTTLMSIDLELTSLNANESEITSFGWVCGRNSSI
ALETCTYSVVKTKAPLGQSPVIHGLIQDNISKGEKVEDVLTRFIAQLPSKILVIHNANLD
LAVLDAVFRRLNLPAQEVYYIDTLQLALYELKKEHEVVPSNSASLGACLLRAGLPEVPQH
NALEDAMAALLLCYAQLASLGLTEQSCLADLSHTKALGRKTLGVVKT
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaatggctaagtgactggttattcgggcgcggaccatcatcattcgataggttt
aaaagcgcgactttacaagacactactttgatgtctatcgatttagagctgacatcctta
aacgccaatgagtcggaaattacatcttttggctgggtgtgtgggcgcaacagtagcatt
gctttagaaacctgcacttatagtgttgttaaaaccaaagcgcctttagggcaaagccca
gttatccatgggctcattcaagacaatatttcaaagggcgaaaaagtagaagatgtgcta
acgagatttatcgcacagttgccttcaaagattctggttatccataatgccaacttagat
ttggcagtgcttgatgcggtatttaggcgcttaaacttgccggcacaagaggtttattac
atcgacaccttacaactcgctttgtatgaattgaaaaaagagcatgaagtcgttccatca
aatagcgcatctttaggcgcttgtttactgagagccggtttaccagaggtgcctcaacac
aatgcattagaagatgccatggccgctttactcttgtgctatgcacagctagcgtcatta
gggcttacggaacaaagttgcttggcggacttatcacatactaaagcccttggtaggaaa
acacttggcgtggttaaaacttaa
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