Alteromonas sp. Mac1: AV939_17900
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Entry
AV939_17900 CDS
T05687
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
ale03021
]
AV939_17900
Transcription machinery [BR:
ale03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
AV939_17900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_11
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AMJ88281
LinkDB
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Position
complement(4233285..4234139)
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AA seq
284 aa
AA seq
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MSNKLQSLALSVPHSGSIEGYVQAVSRIDMLTAEEERALAVRLREDEDLEAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHEEVQTVASELGVSTKEVLQMEARMSSQ
DQAFDLSADEDETGNFAPVQFLEDKSTDVEMDVINNDWDTNASKRLYSAIKTLDDRSQDI
IETRWLADSKITLQDLADKYEVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaataaattgcaatccctagcactatcagttcctcacagcggtagcattgaaggc
tacgtacaagctgtgagtcgtattgatatgctaactgcagaagaagagcgcgcattagcg
gtgcgtcttcgtgaagatgaagatttagaagcagcacgcaagctggttatgtctcatcta
cgctttgttgtgcatattgcaaaatcttattcaggatatggtttgccacaagctgacctt
atccaagaaggtaatattggtctaatgaaggcagttaagcgtttcgacccaacagtgggc
gttcgtttggtttcttttgctgtacattggatcaaagctgaaattcatgagttcgtactc
aagaactggcgaattgttaaagttgctaccacaaaagcgcaacgtaaattgttcttcaac
ttacgcaaagcgaaaaaacgtcttggttggtttacccacgaagaagtgcaaacggtagcc
agcgagctgggtgtgagtacgaaagaagtgcttcaaatggaagcgcgaatgagcagccaa
gatcaagcattcgatctttctgctgacgaggacgaaacgggcaactttgcaccggttcaa
tttcttgaagataaatcaactgatgttgagatggacgttattaacaacgattgggatact
aatgcgagcaagcgtttgtactcagccattaagacgctagatgacagaagccaagatatt
atcgagactcgttggttggccgacagcaaaattacacttcaagatcttgctgataagtac
gaagtatctgctgaacgtgttcgtcaaattgaaaagaacgcgatgaaaaagcttcaagct
gccatggttgcgtaa
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