Alteromonas sp. Mac1: AV939_18890
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Entry
AV939_18890 CDS
T05687
Name
(GenBank) ligand-gated channel protein
KO
K02014
iron complex outermembrane recepter protein
Organism
ale
Alteromonas sp. Mac1
Brite
KEGG Orthology (KO) [BR:
ale00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
ale02000
]
AV939_18890
Transporters [BR:
ale02000
]
Other transporters
Pores ion channels [TC:
1
]
AV939_18890
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GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
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Motif
Other DBs
NCBI-ProteinID:
AMJ88981
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Position
complement(4461461..4463515)
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AA seq
684 aa
AA seq
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MSFSSHAAAQIPEGANTAKSIESIERVVTTGSRIANSTSNSGYVVSSVSSDDISFVSPSH
IQEVLNFIAGAGVQRGNGQEYLPALRSPVLTGAGACGGILAAEDNIPLRAAGFCNINELF
EAHGEMAERIEVLKGPASPLYGSNAIHGVINVITPDVTQDTALYGIDYGSYGYSRLKLRQ
GKDFGNSGVGINASITSDGGYRDEESVDQEKVNLRHRYEVDNLKVTSGLTYTHLDQETAG
YITGFESYKDEDIAQGNDNPEAFRKAKSLRVWSKVDVALSSANALSVTPYFRDQSMEFRM
HFLPGSPLEQNDQEGFGVLSQYHHVVNNTLSIDAGLDAEYTRGSLVQSQDSETVGSAFLV
ETVPEGLHYDYQVDATLYAPFIALNWQQAAWAVSLGGRYEYIDYDYTNNMISGRTRDDGT
ECGFGGCRYARPESGTNDYSNFSPKLSVSFQSSETTLWYAGLSRGYRAPQATELYRLQRS
QQIADLDSVTATNVEVGVKGQHKAFSYVVSAYSLTKDNVIYRDSDFFNVSNGETWHRGVE
LTFNYHISQGLNFAFAGSYAKHTYEHSELLGEVDIEGNDIDTAPNLTFNARLGYSFTQST
QAEIEWQHVDEYYTDAENLNEYEGHDLLNLRASWAISPEVSVYARVNNLLDTAYAERADY
TTFTADRYFPGRPRNVMFSVDYQY
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgttttcttctcatgctgccgcgcaaatcccagaaggcgcaaacaccgccaaaagc
atagaatcaatagaacgtgtagtgacaacaggaagccgaattgctaattccacctcaaat
tcaggatatgtggtatctagtgtttcaagcgatgacataagctttgtatcaccaagccat
atacaagaagtgttaaattttattgcaggcgcgggtgttcagcgaggaaatgggcaggaa
tatttgcctgcactacgctcgccagtgcttacaggggctggggcttgtggcggtatactg
gctgctgaagataacattcctttacgcgcagccggtttttgtaacattaacgagttgttc
gaagcccatggcgaaatggctgaacgcatcgaggtcttaaaaggccctgcttcacccctt
tatggctctaacgctattcacggcgtgataaatgttattacccccgatgttacccaagac
accgctttatacggaattgattatggttcttacggctatagcagactgaagctaaggcaa
ggtaaagactttggtaattcgggtgtaggtataaacgcgagtattaccagcgacggcggg
tatcgagacgaagaaagtgtggatcaagaaaaggttaaccttcgccaccgctacgaagtt
gataacctaaaggtaaccagtgggctgacgtacacccacttagatcaagaaaccgctggt
tacattactgggtttgaaagctataaagatgaagatatcgcccaaggtaacgacaaccct
gaagcctttcgaaaagcgaaaagtttgcgagtgtggagtaaagtagatgtagcattaagc
agcgccaatgcactgtcagttacgccatacttccgcgaccaaagcatggaatttcgcatg
catttcttacccggttcacctcttgaacaaaacgaccaagaaggctttggtgtactttcc
caatatcatcatgtggtgaacaatacgttaagtattgatgctgggttagatgctgagtat
acccgaggaagcttggtacaatcccaagatagcgaaactgtgggctctgcttttctagtg
gaaaccgtgcctgaagggcttcattacgactaccaagtagacgctaccctttatgcgcca
tttattgcgcttaattggcaacaagcagcgtgggcggtttcactgggtgggcggtatgag
tatattgattacgattacaccaacaacatgatatcgggtcgtactcgtgatgatggcact
gaatgtggctttggtggctgtcgatacgcaagacctgaaagtggtactaacgactacagt
aattttagccctaaactctcggtgagttttcaaagcagtgaaacaacgttatggtatgcg
ggcttatctcgaggctatcgtgccccgcaagcaactgagctttacagacttcagcgcagt
caacaaattgccgacttagactctgtcaccgccaccaacgtagaagtgggtgttaaaggg
cagcacaaagcctttagctatgtggtatctgcttatagcttaactaaagacaatgtgatt
tatcgtgatagtgattttttcaatgtaagcaatggagaaacctggcacagaggggtagag
ctaacctttaactatcacatcagccaaggtctgaattttgcgtttgcaggcagctatgcc
aaacatacgtatgagcacagtgagcttttgggtgaagtcgatattgagggcaacgatatt
gatactgcgccaaaccttaccttcaacgctcgcctagggtacagctttacgcaaagcacc
caggctgaaattgagtggcagcatgttgatgaatactataccgatgctgaaaaccttaac
gagtacgaaggtcatgatttattgaatctacgggcctcttgggcaatttcgccagaagtc
tcagtgtacgcaagagtgaataatttgctcgataccgcctatgctgaacgggccgattac
acaacctttaccgcagataggtactttccagggcggccaagaaacgtaatgtttagcgtt
gattatcagtattag
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