Agrobacterium leguminum: CFBP4996_04145
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Entry
CFBP4996_04145 CDS
T09300
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aleg
Agrobacterium leguminum
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aleg03016
]
CFBP4996_04145 (rnd)
Enzymes [BR:
aleg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CFBP4996_04145 (rnd)
Transfer RNA biogenesis [BR:
aleg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFBP4996_04145 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
wHTH-Calcineurin_assc
Motif
Other DBs
NCBI-ProteinID:
WFS66493
LinkDB
All DBs
Position
Circular:complement(841657..842817)
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AA seq
386 aa
AA seq
DB search
MIETTAALAEACTELAKSEFITIDTEFLRETTFWPELCLVQMASPTLEVLVDPLAKGLDL
TPLFELMANPDVVKVFHAARQDIEIIYHLGGLIPHPIFDTQVAAMVCGFGDSISYDQLVQ
KIKNVQIDKSSRFTDWSRRPLTEKQLDYALADVTHLRDVYLSLKAQLEREGRSLWLTEEM
DILESRDTYDMHPDDAWLRLKSRLRKPTELAILKFIAAWREREARSRNVPRSRVLKDDAI
FEIAQQQPKDAEALSRLRTIPKGWERSASGTAIVETVNAALALPKEEMPKAPRHSHAPEG
SGAAVELLKVLLKLTADKHGVAAKVIANSDDLDKIAAEGEKATVAALTGWRRELFGDVAL
KLINGEVALRFAGKKVEAVEVAASEP
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgattgaaacgactgccgccctcgccgaagcctgcacggaactggcgaaatcggaattc
atcaccatcgacaccgaatttctgcgggaaacgaccttctggccggaactctgcctcgtg
cagatggcaagcccgacgctcgaagtgctggtcgatccgctggcgaagggtctcgacctg
accccgcttttcgaactgatggccaatcccgatgtcgtgaaggttttccacgccgcgcga
caggatatcgagatcatctatcatctcggcgggcttattccgcacccgatcttcgacacg
caggtcgccgccatggtctgcggtttcggcgattcgatctcctacgaccagctggtgcag
aagatcaaaaacgtgcagatcgataaatcctcgcgtttcaccgactggagccgccgtccg
ctgaccgaaaagcagctggattacgcgctggccgacgtgacccatctgcgcgatgtctat
ctctcgctgaaagcccagctcgagcgcgaaggccgctcgctgtggctgaccgaagaaatg
gatattctcgagtctcgcgacacctatgacatgcatcccgacgatgcctggttgcggttg
aagtcgcgcctgcgcaagccgacggaactcgccatcctcaaattcatcgccgcctggcgc
gagcgtgaggcgcgctcccgcaacgtgccgcgctcgcgcgtcctgaaggacgatgcgatc
ttcgaaatcgcccagcagcagccgaaggacgccgaggcgttgtcgcggcttcgcaccatt
cccaagggctgggagcgctccgcctccggcaccgccatcgtcgaaacggtgaatgcggcg
ctggcgctgccgaaagaggaaatgccgaaggcgccgcgtcacagccacgcaccggaaggc
tccggcgctgccgtggaacttttgaaagttctgctgaagctgacggcggacaagcatggc
gtcgccgccaaggtcatcgccaatagcgacgatctggacaagatcgccgccgagggcgaa
aaggcaaccgtggcggcgctgaccggctggcggcgggaactcttcggcgatgtggccctg
aagctcatcaatggcgaagtggccctgcgtttcgccggcaagaaggtcgaggcggtggag
gttgcggcaagcgagccgtaa
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