Agrobacterium leguminum: CFBP4996_06260
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Entry
CFBP4996_06260 CDS
T09300
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aleg
Agrobacterium leguminum
Pathway
aleg03410
Base excision repair
aleg03430
Mismatch repair
aleg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CFBP4996_06260 (recJ)
03430 Mismatch repair
CFBP4996_06260 (recJ)
03440 Homologous recombination
CFBP4996_06260 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aleg03400
]
CFBP4996_06260 (recJ)
DNA repair and recombination proteins [BR:
aleg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CFBP4996_06260 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CFBP4996_06260 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CFBP4996_06260 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
WFS67160
LinkDB
All DBs
Position
Circular:complement(1256888..1258696)
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AA seq
602 aa
AA seq
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MAMMEPADTVARAFLSVERSATEQRWVSRLDQAGQNRALAMSQIHAIPELIARVLAGRGV
GVDDALAFLDPTIRSLMPDPHVLTDCEKAAERLVRAIETGEKVAIFGDYDVDGAASSALM
YRFLAHFGLTPEIYIPDRIFEGYGPNPAAMQQLAANGATLIVTVDCGSTSHESLKAARDA
RTDVVVIDHHQVGTELPPAVALVNPNREDDLSGQGHLCAAGVVFLVLVATLRLLKEKRHR
QAFTLDLLSLLDIVALATVCDVVPLKGLNRAYVVKGLIAARHMNNAGLAALFKKAGLGGP
VTPYHFGFLIGPRINAGGRIGDAALGSRLLTIDDASQAEVIAERLDELNRERQAMEAAML
AEAEAEALFEYGDGSGAGVIVTAHENWHPGIVGLLASRLKDRFRRPAFAIAFDPSGKGTG
SGRSINGFDMGRMVRAAVEAGLLVKGGGHAMAAGLTVERANLGKLRTFFEEAAAKTVNEL
VESSVLKIDGAIGASGATLQLVDQLEQAGPYGSGHSQPIFAVPAHRLRDVRLVGTAHVKI
TLEAMDGSRLDGIAFRAAEAPLGQMLLNARGRNIHVAGTVGADLWQGQRRVQLRVLDAAF
AP
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atggcaatgatggagccggccgataccgtggcccgcgcgtttctaagcgtggagcggtcg
gcgacagaacagcgctgggtgtcgcggctggatcaggccgggcagaaccgcgcgctggcc
atgtcccagatccacgccattccagaactgatcgcacgggtgcttgccgggcgcggtgtg
ggtgtcgatgacgccctggcgttcctcgatccgaccattcgttccctgatgcccgatccg
catgtgctgaccgattgcgaaaaggccgccgagcggttggtgcgggccatcgagacaggc
gagaaggtggcgatctttggcgactacgacgtcgacggcgctgcttcctccgctttgatg
taccggtttctcgcgcatttcggtctgacaccggaaatctatattcccgaccgtattttc
gagggctatgggccgaacccggcggcgatgcagcagcttgccgccaatggtgcgacgctg
atcgtgacggtcgattgcggctccaccagccatgaatcgctgaaggctgccagggatgcg
agaacggatgtggtggtgatcgaccaccatcaggtcggcacggagctgccgccggccgtg
gcgctggtcaatcccaaccgcgaggacgatctgtcggggcaggggcatctctgtgccgcc
ggcgtcgtgttcctcgtgctggtggccaccctgcggctgttgaaagaaaagcggcacagg
caggccttcacgctcgatctgctgtcgcttctcgatatcgtcgcgcttgccaccgtgtgc
gatgtggtgccgctgaaggggctcaaccgcgcctatgtggtgaaggggctgattgccgcg
cgccatatgaacaatgccgggcttgctgccttgttcaagaaggcggggctgggcgggccg
gtgacgccctatcatttcggtttcctgatcgggccgcgcatcaatgccggcggccgcatc
ggcgacgctgcgctcggcagccgtctcctgaccatcgatgatgcgtcgcaggccgaagtc
attgccgagaggctggatgagctgaaccgcgagcggcaggccatggaagccgccatgctg
gcggaagcagaagcggaggcgctgttcgaatatggcgacggctcgggtgcgggcgtcatc
gtgactgcgcatgaaaactggcatcccggcattgtcggtctgcttgcctcgcgtctgaag
gatcgcttccgccgtcccgccttcgccattgccttcgatccctccggcaagggcaccggt
tccggccgttcgatcaacggcttcgatatggggcgcatggtgcgcgccgccgtggaggcc
ggcttgctggtcaagggcggtgggcatgctatggcggccggcctgacggtggagcgcgcc
aatctcggcaagctcaggactttcttcgaggaagcggcggcaaagaccgtgaacgagctg
gtggaaagcagcgtgctgaagatcgacggtgccatcggcgcgtcgggcgcgacattgcag
cttgtcgaccagctggagcaggccggtccatatggctccggtcattcgcagcccatcttt
gccgtgccggcgcatcgtctgcgcgatgtgcggcttgtgggtacagctcacgtcaagatc
acgctggaagccatggacggctcgcgactggacggcatcgcgttccgcgccgcagaagcg
cctctggggcagatgctgctgaatgcacgcggccggaatattcacgtcgccggcaccgtg
ggcgccgatctctggcagggccagaggcgcgttcaactgcgcgttctggacgcggctttc
gcgccctga
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