Agrobacterium leguminum: CFBP4996_08820
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Entry
CFBP4996_08820 CDS
T09300
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
aleg
Agrobacterium leguminum
Pathway
aleg00470
D-Amino acid metabolism
aleg00550
Peptidoglycan biosynthesis
aleg01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFBP4996_08820 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
CFBP4996_08820 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
aleg01011
]
CFBP4996_08820 (murD)
Enzymes [BR:
aleg01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
CFBP4996_08820 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
aleg01011
]
Precursor biosynthesis
Amino acid ligase
CFBP4996_08820 (murD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
2-Hacid_dh_C
TrkA_N
MurD-like_N
KARI_N
UDPG_MGDP_dh_N
NAD_binding_2
ELFV_dehydrog
Motif
Other DBs
NCBI-ProteinID:
WFS64650
LinkDB
All DBs
Position
Circular:complement(1786925..1788334)
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AA seq
469 aa
AA seq
DB search
MIPVTSFKGKKVALFGLGGSGLVTARALVAGGADVVAFDDNPDSVAKAEAEGIKTADLRT
IDWPNFSSFVLAPGVPLTHPKPHWSVDLAKAAGVEIIGDIELFIRERRAHAPDCPFIAIT
GTNGKSTTTALIAHILKASGRDTQLGGNIGTAVLSLDPPKAQRFYVVECSSYQIDLAPTI
NPTAGILLNLTPDHLDRHGTMQHYADVKERLVAGSGTAIVGVDDSHSTLIADRIERAGVK
VERISKRNVVSEGLHAEGSRILRAHGGTSALLVDLDGIQTLRGSHNAQNAAAAIAACLAV
GVSEEEVRAGLKSFPGLKHRMQPVGRRGNVTFVNDSKATNADAAAPALSSFDRIYWIAGG
LPKAGGITSLSPLFPRIAKAYLIGEAAAEFAATLGEAVPYEISGTLDKAVQHAAADAEKD
ATAGNIVMLSPACASFDQYKNFEIRGDSFVTQVAALDGMTMLVDSGKGG
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggtcacgtcgttcaaaggtaagaaggtcgcgcttttcgggcttggtggttcg
ggcctcgtcaccgcccgcgcactggtcgcgggtggggcggatgtcgttgctttcgacgac
aatcccgacagcgtcgcgaaggccgaggccgaaggcatcaagacggcggatctccggacg
attgactggccgaacttctcttccttcgttctggcgcccggcgtgccgctgacgcatccg
aaaccgcattggtcggtcgaccttgcgaaagctgcgggcgtcgagatcatcggcgatatc
gagcttttcatccgcgagcgccgtgcgcacgcgccggattgccctttcatcgcgattacc
ggcaccaacggcaagtccacgacgacggcgctgatcgcgcatattctcaaggcgtccggc
cgcgatacgcagctcggcggcaatatcggaacggcggtactgagcctcgatccgccgaag
gcgcagcgcttctatgttgtcgagtgctcgtcctaccagatcgatctcgcaccgacgatc
aatccgaccgccggcattctgctcaatctgacgcctgatcatctcgaccgtcacggcacg
atgcagcactatgccgatgtcaaggagcggctggtggcaggtagcggcacggcaattgtc
ggtgtggatgacagccattcgacgctgatcgccgaccgtatcgaacgcgccggtgtcaag
gtggagcgcatttccaagcgcaatgtcgtttccgaaggtcttcatgccgaaggcagccgc
atcctgcgggcgcatggcggcacttccgcgctgctggttgatctcgacggtatccagacc
ctgcgcggcagccacaatgcgcagaatgctgcggcggcaatcgccgcctgccttgccgtc
ggggtttccgaagaggaagttcgcgcaggcctgaagtcttttcccggcctcaagcatcgt
atgcagccggtcggccgacgtggcaatgtcaccttcgtcaacgacagcaaggccaccaat
gccgatgctgcggcaccggcgctttcaagtttcgaccgtatctactggatcgccggcggt
ctgcccaaggcaggcggcatcaccagcctttcgccgcttttcccgcgcatcgccaaggcg
tatctgatcggcgaggcggcggccgaatttgccgcgacgcttggcgaggccgtgccttac
gaaatatccggcacgctggacaaggccgtgcaacatgcggcggcggatgcggaaaaagat
gcgacggctggcaatatcgtgatgttatccccggcttgcgcaagcttcgatcaatataag
aactttgagatcagaggcgattcgttcgtcacgcaggtcgcggcgctcgatggcatgacg
atgctggttgactctggaaaagggggctga
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