Agrobacterium leguminum: CFBP4996_12300
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Entry
CFBP4996_12300 CDS
T09300
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
aleg
Agrobacterium leguminum
Pathway
aleg00300
Lysine biosynthesis
aleg00470
D-Amino acid metabolism
aleg01100
Metabolic pathways
aleg01110
Biosynthesis of secondary metabolites
aleg01120
Microbial metabolism in diverse environments
aleg01230
Biosynthesis of amino acids
Module
aleg_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
CFBP4996_12300 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
CFBP4996_12300 (dapF)
Enzymes [BR:
aleg01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
CFBP4996_12300 (dapF)
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Paralog
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WFS65303
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All DBs
Position
Circular:complement(2554262..2555164)
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AA seq
300 aa
AA seq
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MADTVEFAKMNGLGNKILVIDMRGRKDMVTPAAAIALNADPSTQFDQIMAIHDPRVSGTD
AFIDILNCDGTKAQACGNGTRCVVQALSSETGKTSFTFQTVAGILNAVEHEDGMISVDMG
LPRFRWSDIPLSEEFHDTSRIELQIGPIDAPILHSPAAMSMGNPHAIFWVDRDPMEFDLE
RFGPLLENHPMFPEKANITLAQVISDSALRTRTWERGAGLTLACGSAACASAVSAARTGR
TGRKVTIDVASSPIRVPLTIDWRADNHVIMTGPAEWEWSGSVDPVTGAWSRDVAAEQGTV
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcggatacggtcgaatttgcgaagatgaacgggcttggcaacaagatcctcgttatc
gacatgcgcggccgcaaggatatggtcacgccggcggcggcgattgcgctgaacgccgat
ccttcgacccagttcgaccagatcatggccattcacgatcctcgtgtcagtggcacggat
gcctttatcgacatcctcaattgcgatggtacgaaggcgcaggcctgcggcaatggcaca
cgctgcgtggtgcaggcgctgtcctccgaaacgggcaagaccagtttcacctttcagacg
gtggcgggcattctgaatgccgtcgaacatgaagacggcatgatttccgtcgatatgggc
ctgccgcgtttccgttggagcgatattccgctttcggaagagttccacgataccagccgc
atcgaattgcagatcgggccgatcgatgcgccgatcctgcattcgccggccgccatgtcc
atgggtaatccgcatgcgattttctgggtggatcgcgatccgatggagttcgatctcgaa
cgtttcgggcctctgctcgaaaaccatccgatgttcccggaaaaggccaatatcacgctg
gcgcaggtaatttccgacagcgcgctgcgcacccgtacctgggagcgcggcgccgggctg
acgctcgcctgcggttcggccgcctgcgcttcagcggtttctgcggcgcgcacgggccgc
accggcaggaaggttacaatcgatgtcgcctccagccccatccgtgtgccgctgaccatc
gactggcgcgcggataatcacgtcatcatgaccggcccggccgaatgggagtggtccggt
tccgtcgatcccgtaaccggcgcatggtcgcgggatgttgcggcggagcaggggaccgta
tga
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