Agrobacterium leguminum: CFBP4996_13110
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Entry
CFBP4996_13110 CDS
T09300
Symbol
addB
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
aleg
Agrobacterium leguminum
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aleg03400
]
CFBP4996_13110 (addB)
Enzymes [BR:
aleg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CFBP4996_13110 (addB)
DNA repair and recombination proteins [BR:
aleg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
CFBP4996_13110 (addB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
WFS65457
LinkDB
All DBs
Position
Circular:complement(2740951..2744136)
Genome browser
AA seq
1061 aa
AA seq
DB search
MTLTHHAKRVLTIAAGTPFLKTLAETLCDGTLTAGYKYDPADPLSLAKVTIYVPTRRSAR
VLRSEFVDLLGGRSAILPLIRPLGETDDDSGFFEIENPEIMDLAPPISGTGRLIELARLI
LAWRNSLPDAIRAIHSDSPLVAPASPADAIWLARALGEVIDAMDTEEKDWEALQRLDTGD
HAQWWQLTADFLRIASVFWPARLAELNRSSAGRHRNAILRAEANRLANLPDTGPIIVAGS
TGSIPAAADLIAAVAALPQGTVVLPGLDLAMPEEQWEAIAEDPTDPSSRTHSQYGLYMLL
QKLGILRDDVVQMGAIDSDLEKRAAVFSAALAPAKSTSDWNRWREDRQPGFFDDAFATAT
LMEAANEREEATAIAVALRLALEAPGAGRPSQAALITPDRGLARRVATELQRFGIEADDS
AGTPLSATPQAGLTQLALEAILRPGDPVPIISLLKHPLSRFGLSDEAFAKASKALELIAL
RGGRVETEIGNLEAVLEAQLLAQRDDRHPPAWRLALPEASAEAARDLARRIAIATEPLGS
AFIRKDRSGRAFTDKLPLSVWAERTGRVIEAICADENSDLAALWSGEAGDKLSELFGELM
ESGEILDADGPQWIDIFAALVAGESIKPRSMRHPRIFIFGALEARLQSVDTVVIGGLNEG
LWPGQTANNPFLSRTMKTAIGLEPPERRIGQLAHDFEMANGTRQIFYTRALRQGSTPAVA
SRWLQRLLALGGEDFADKLRKRGETYRHWAGLMDESIDQEAAKRPAPKPPAELQPTRYSF
SEVGRLRRDPYSIYARRILKLDPLDPFNRDPNAADRGTLYHAIIERYSREGHIPGTPASL
AAMQRILDECFDAENLPPHVDVIWRPRFAAVARAFIDWEKERHPSIRHSFYEARAGQEIV
EAGIRLTGIADRIDIKTNGQADIIDYKTGLAPSVNQARALLDPQLALEAAALMRGAFREA
GSPTPENLIYVRLRPGERFFADQVNNEHSSRSGKRPPKSAIELATESIEQLAKFVHSLRD
GENGFASRLVPEEQQSYGGEYDHLARVSEWSTAEPGDGDDD
NT seq
3186 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcacccaccacgcaaagcgcgttctgacgatcgctgcaggaacgccgttcctc
aagacgctcgcggaaacgctgtgtgacgggacactgacagccggctataaatatgatccg
gccgatccgctgtcgcttgccaaggtgacgatctatgtgccgacgcggcgctccgcccgt
gtgctgcgctccgaattcgtcgatcttctgggcggccggtccgccattctgccgctgatc
cggccgctgggcgaaacggacgacgacagcggcttcttcgagatcgaaaatcctgaaatc
atggatctggcgccgccgatttccggcaccggccggctgatcgaactggcgcgtctcatt
ctcgcctggcgcaacagcctgccggacgccatccgggcaattcactcggattcgccgctt
gtcgcccccgccagccccgcagacgccatatggctggcgcgtgcgcttggcgaggtgatc
gatgcgatggatacggaagaaaaggactgggaagcgcttcagcgtctcgatactggcgat
cacgcccaatggtggcagctgacggcggatttcctgcggatagccagcgtcttctggccg
gcgcggcttgccgaactcaaccgttcctcggccggtcggcatcgcaacgccatcctgcgg
gcggaagcgaaccggcttgccaatttgccggatacgggaccgatcatcgtcgccgggtcg
acgggttccattcctgccgcagccgatctcatcgccgccgttgccgccttgccccagggc
accgtcgtgcttccggggctagaccttgccatgccggaggagcaatgggaggcaatcgcc
gaggaccctaccgatccttcgagccgcacccactcgcaatatgggctttatatgctgctg
cagaagctcggcatcctgcgcgacgatgtggttcagatgggcgccatcgatagcgatctg
gaaaagcgcgcagccgtgttttcggccgcactcgcgccggccaaatccaccagcgactgg
aatcgctggcgcgaggacaggcagcccggctttttcgacgacgccttcgcgacggccacg
ctgatggaagccgccaatgagcgcgaggaagcgacggccatcgcggtcgctctgcggctg
gcgcttgaagccccaggcgctgggcgtccgtcgcaggcggcgctgataaccccagaccgc
gggctggcgcggcgcgtggcgactgagttgcagcgcttcggcatcgaagccgacgactcg
gcaggtacgccgctctccgccaccccacaagcggggctgacgcaactggcgctggaagcg
atcctgaggcccggcgacccggtgcctattatctcccttctgaaacatccgctcagccgt
ttcgggctttccgatgaagctttcgcaaaagcctccaaagcgctcgagctgatcgcgctg
cgtggcggccgtgtcgagaccgaaatcggcaatctggaagcggttctggaggcgcagctt
ctggcgcagcgcgatgaccggcacccacctgcctggcggttggcgctgccggaggcaagc
gcggaggccgcgcgcgacctggcacggcggattgccattgcgaccgagccgcttggctcc
gcctttatccgcaaagatcgatccggccgcgccttcaccgataaattgccgctgtctgtt
tgggcggagcggacgggccgcgtgatcgaagccatctgcgcggatgaaaacagcgatctt
gccgcgctctggtccggtgaagcgggagacaagctttccgagctgttcggcgagctgatg
gaaagcggcgaaatcctcgatgcggatggaccgcaatggatcgatatttttgcggcactg
gtagccggtgaatcgatcaagccaagatcgatgcgtcatccgcgcattttcatcttcggc
gcgcttgaggcacggctgcaaagcgtcgataccgtcgtcatcggcggtctcaatgaagga
ctctggccggggcagacggcgaataatccattcctgtcccgcaccatgaagaccgccatt
ggcctcgaaccgccggaacgacgcatcggccagcttgcgcatgatttcgagatggcaaat
ggcacccggcagattttttacacccgcgcgctgaggcagggctcaacgcccgctgtcgcc
tcacgctggctgcagcgtcttctggcgctgggcggcgaggattttgccgataaactcagg
aagcgcggcgagacctatcgccattgggcgggattgatggatgaaagcatcgatcaggaa
gcggcaaagcgccctgccccgaaaccgccggccgagttgcagccgacgcgctattccttc
agcgaagtggggcggctgcgtcgcgatccctattcgatctatgcgcgacgcatcctgaag
ctggacccgctcgatcccttcaatcgcgatccgaacgccgccgaccgcggcacgctctat
cacgcgattatcgagcgctattcccgtgagggacatattcccggcacaccggcctcgctc
gcggccatgcagcgcattctggacgaatgtttcgatgcggaaaacctgcctccccatgtg
gatgtcatctggcgaccgcgttttgcggcggtagcgcgcgcctttatcgactgggaaaaa
gaacgtcatccatccattcgccacagcttctacgaggcgcgcgccgggcaggaaatcgtc
gaggcgggtataaggctgacggggatcgccgaccgcatcgacatcaagacaaacggtcag
gcggatattatcgactacaagacggggcttgcgccttccgtcaatcaggcgcgcgcgctg
ctcgatccgcagcttgcgctggaggcggccgcactgatgcgcggcgccttccgcgaagcc
ggttcgcctacaccggaaaacctcatctatgttcgcctgcggccgggcgagcgttttttt
gccgatcaggtcaataacgaacattccagccgaagcggcaaaagaccgccgaaatcggcg
attgagctcgcgacggaatcgatcgaacagctcgccaaattcgttcattccctgcgtgac
ggcgaaaacggcttcgcctcgcggctcgtgccggaagagcaacaatcctatggcggggaa
tatgaccacctcgcccgcgtttcggaatggtcgacggcagaaccgggagacggcgatgac
gattga
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