Agrobacterium leguminum: CFBP4996_13515
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Entry
CFBP4996_13515 CDS
T09300
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
aleg
Agrobacterium leguminum
Pathway
aleg03030
DNA replication
aleg03410
Base excision repair
aleg03420
Nucleotide excision repair
aleg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP4996_13515 (polA)
03410 Base excision repair
CFBP4996_13515 (polA)
03420 Nucleotide excision repair
CFBP4996_13515 (polA)
03440 Homologous recombination
CFBP4996_13515 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aleg03032
]
CFBP4996_13515 (polA)
03400 DNA repair and recombination proteins [BR:
aleg03400
]
CFBP4996_13515 (polA)
Enzymes [BR:
aleg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP4996_13515 (polA)
DNA replication proteins [BR:
aleg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CFBP4996_13515 (polA)
DNA repair and recombination proteins [BR:
aleg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CFBP4996_13515 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP4996_13515 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
WHD_BrxR
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
WFS65528
LinkDB
All DBs
Position
Circular:2830756..2833755
Genome browser
AA seq
999 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRTAPPEDLVPQFGLIREATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTANVHMYDAMKDKQIGIPDVVEKWGVGPE
KMIDLQAMTGDSTDNVPGIPGIGPKTAAQLLEEYGDLDTLLARAGEIKQQKRRENIIANA
ELARLSRQLVALRTDVPLDQSLEALVLEPQNGPKLIAFLKAMEFTTLTRRVAEATETDAS
AIDPANVPVQWGADAHGPDLDAPAAAVKAGEVAADATGAAASPAAPARKVTGEGSAPADL
ATARQALFSAAKIDTTAYLTIRDLATLDRWIAAARETGVVAFDTETTSLDPMQAELVGFS
LAIADNGKDATGTDIRAAYVPLTHKTGSGGDLFSDGIKLAEGQVPFAEALARLKDLLEDE
AVLKVAQNLKYDYLLMKRHGVVMQSFDDTMLISYVLEAGKATHGMDSLSERWLGHTPIAY
KDVAGSGKSSVTFDFVDIDKATAYAAEDADVTLRLWMALKPRLVSERLTKVYERLERPLV
PVLAHMEERGITVDRQILSRLSGELAQKAASFEEEIYELAGERFNIGSPKQLGDILFGKM
GLPGGSKTKTGQWSTSAQVLEDLAAEGAELPRKIVDWRQLTKLKSTYTDALPGYIHPETK
RVHTSYALASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGHKLLSADYSQIELRV
LAHVADIPQLRNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISAFGL
ANQLGIARSEAGDYIKKYFERFPGIRDYMEATKAFARENGYVETIFGRRAHYPEIRSSNP
SVKAFNERAAINAPIQGSAADIIRRAMVRIEPALEAEKLSARMLLQVHDELIFEVEEAEI
EKTLPVVVSVMENAAMPAISMRVPLKVDARAADNWDEAH
NT seq
3000 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgttgacggttccggtttcattttccgggccttc
catgcaatcccgccgctgaaccgcaagtcggacgggctgccggtcaacgccgtctccggc
ttctgcaacatgctgtggaagctgctgaaggatgcgcgcaataccgatgtcggcgtgacg
ccgacccattttgcggtgattttcgactattcgtcgaagaccttccgcaacgaactttat
gatctctacaaggccaaccgcaccgcgccgccggaagatctggtgccgcaattcggcctg
atccgtgaggcgacgcgcgccttcaaccttccctgcatcgagaccgaaggcttcgaggcg
gacgatatcatcgccacctatgcccggcaggccgaggcgatcggcgccgatgtcacgatc
atctcctccgacaaggatctgatgcagctcgttacggccaatgtacatatgtacgacgcc
atgaaggacaagcagatcggcattccggacgttgtcgaaaagtggggcgtaggccccgaa
aaaatgatcgacctgcaggcgatgaccggcgactcgaccgataatgttccgggcattccc
ggcatcgggccgaagacggcggcgcaattgctggaggaatacggcgatctcgatacgctg
ctggcgcgggcaggcgaaatcaagcagcagaagcgccgggaaaatatcatcgccaatgcg
gagcttgcccgcctttccagacagctcgtggcgctcagaaccgatgtgccgctggatcaa
tctctcgaagcgctggtgctcgaaccgcagaacgggccgaaactgatcgccttcctgaag
gcgatggagttcacgacgctgacacgccgggtggccgaggcgaccgaaaccgacgcttcc
gccatcgaccctgccaatgtgccggtacaatggggtgccgatgcccatggtcccgatctc
gatgcgccggccgctgccgtgaaggctggcgaagtggccgctgatgcgacgggcgctgcg
gcttcgcctgccgctccggcaaggaaagtaacgggggagggcagcgcgcccgctgatctc
gccacagcgcgacaggcgcttttttccgccgccaagatcgatacgaccgcttatctaacg
atcagggaccttgcgacgctcgaccgctggatcgcggcggcccgcgagacaggcgttgtc
gccttcgatacggaaacgacctcgctcgacccgatgcaggcggaacttgtcggtttttct
ctggccattgccgacaacggcaaggatgccacgggcaccgatatccgggccgcttatgtt
cctttgacgcacaagaccggttccggcggcgatctcttcagcgatggcatcaaactggcc
gaagggcaggtgccctttgccgaggcgctggcgcgtctgaaggacctgctcgaggacgaa
gccgttctgaaggtcgcgcagaacctgaaatatgactatctgctgatgaaacgccacggc
gtcgtcatgcagagcttcgacgacacgatgctgatttcttatgtccttgaggccggcaag
gcaacgcatggtatggattccctgtccgaacgctggctcggccacacgccgatcgcctat
aaggacgtggcgggatcgggcaagtcgagcgtcaccttcgattttgtcgatatcgacaag
gcaaccgcttatgctgcggaagatgccgatgtcaccctgcggctctggatggcgctgaag
ccgaggcttgtctcggaacggctgaccaaggtttatgagcggctggagcgtcccctcgtg
ccggttctggcgcatatggaagagcgcggcatcaccgtcgaccggcagattctctcgcgt
ctttccggcgaactcgcccagaaggctgcatccttcgaagaggaaatctacgagctggcg
ggtgagcgcttcaacatcggctcgccaaagcagctcggcgatattctgtttggcaagatg
ggcctgccgggcggttccaaaaccaagaccgggcaatggtcgacatctgcgcaggttctc
gaagatctcgcagcggaaggcgccgaactgccgcgcaagatcgtcgactggcggcagctg
acgaagctgaaatcgacctatacggatgcgctgccgggatatatccatcccgagacgaaa
cgggtgcatacgtcctatgcgcttgcctccaccaccacggggcgtctgtcctcctcggag
ccgaacctccagaacatcccggtccgcaccgccgaaggccgcaagatccgcacggctttc
atctccacgcccggtcacaagcttctgtcggccgattacagccagatcgagctgcgcgtg
ctggcccatgtcgccgatattccgcagctccgtaacgcctttgaaaacggcatcgacatt
cacgccatgacggcatcggaaatgttcggcgtgccggtggaaggcatgccgtcggaagta
cgccgccgcgcgaaggccatcaacttcggtatcatctacggcatttccgccttcgggctc
gccaaccagctcggcatcgcccgctcggaggcaggcgactatatcaagaaatatttcgag
cgctttcccggcattcgcgactacatggaggcaaccaaagccttcgcccgcgaaaacggc
tatgtcgaaacgattttcggccgccgtgcccattatccggaaattcgctcttccaaccct
tcggtaaaagccttcaacgaacgcgcggccatcaacgcgccgatccagggctccgccgcc
gatatcatccgccgcgccatggttcgtatcgagcctgcgctggaggcggaaaagctttcc
gcccgcatgcttttgcaggtgcacgacgaactcatcttcgaagtcgaggaagcggaaatc
gaaaagaccttgccggtcgtcgtctcggtgatggaaaacgcggccatgccggcgatttcc
atgagggtgccgctgaaagtggatgcccgcgcggctgacaattgggatgaggcgcactaa
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