Agrobacterium leguminum: CFBP4996_21300
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Entry
CFBP4996_21300 CDS
T09300
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aleg
Agrobacterium leguminum
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aleg03032
]
CFBP4996_21300
03400 DNA repair and recombination proteins [BR:
aleg03400
]
CFBP4996_21300
Enzymes [BR:
aleg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
CFBP4996_21300
DNA replication proteins [BR:
aleg03032
]
Prokaryotic type
DNA Topoisomerases
CFBP4996_21300
DNA repair and recombination proteins [BR:
aleg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFBP4996_21300
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
WFS68537
LinkDB
All DBs
Position
Linear:complement(1452070..1453086)
Genome browser
AA seq
338 aa
AA seq
DB search
MPQPPTRLLAKIGLAYVNDQEPGIAREKRGRGFCYRLPGGELLSDSVELKRIKALGVPPA
YKDVWICIDPAGHLQATGFDARGRKQYRYHPDWHALRGETKFFQLKSFGRALPAIRRRAI
ADIEKQDHGPEMTLAALTLLLDAAYLRVGNRSYLETNGTYGATTLLKRHVSFGETIELRF
AAKGGQKVKRQLRHPRLQKILEEIADLPGKELFVWQDSENRVHSVDSSDLNAYLSRIGGQ
GISAKTFRTWGGTLAAFCNAMEHVAAGDKPSMKGMCEAAAAELSNTPAICRKSYVHPAVL
DIATEEKAQKKLGRILKVGAKPVSGLRADERRLLAFLP
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atgccacagccgcccacccgccttcttgccaaaatcggacttgcctatgtcaacgatcag
gagccgggtattgcccgcgagaaacgcggacgcggtttctgttaccgtctgccgggcggc
gaacttctgtccgacagcgtcgaactgaagcgcatcaaagcgctcggcgtgccgcccgcc
tataaggacgtgtggatctgcatcgaccccgccggccatctgcaggctacgggtttcgat
gcccgcgggcgaaaacaatatcgttatcatcccgactggcacgcgctccggggcgagacg
aaattcttccagctgaaaagcttcggcagggcgctgcccgccatccgccgccgcgccatc
gccgatatagaaaaacaggatcatgggccggaaatgacgctcgcggcgctcacactgctg
ctcgatgccgcctatctgcgcgtcggcaaccgctcctatctcgaaaccaacggcacctat
ggtgcaacgacattgctcaagcggcacgtctccttcggtgaaaccatcgagctgcggttt
gccgccaagggcgggcagaaggtgaaacgacaattgcgccacccccgccttcagaaaatc
ctcgaggagatcgccgatctgcccggcaaggaactcttcgtctggcaggatagtgaaaac
cgcgtgcattcggtcgattccagcgaccttaacgcttacctctcccgcatcggcgggcaa
ggcatttccgccaagacctttcgtacctggggcggaacgctcgccgccttctgcaacgcc
atggaacatgtggcggcgggcgacaagccgagcatgaagggcatgtgcgaggcagcggcg
gcggagctttccaacacgcccgccatctgccgcaagagctatgtgcacccggccgtcctc
gatatcgcgacggaagagaaagcgcagaaaaagcttggccgcatcttgaaagtcggggca
aagcccgtctccggcctcagggcggatgaaagacggctgcttgccttcctgccctga
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