Agrobacterium leguminum: CFBP4996_21655
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Entry
CFBP4996_21655 CDS
T09300
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aleg
Agrobacterium leguminum
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aleg03016
]
CFBP4996_21655
Enzymes [BR:
aleg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
CFBP4996_21655
Transfer RNA biogenesis [BR:
aleg03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CFBP4996_21655
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNase_H_2
Motif
Other DBs
NCBI-ProteinID:
WFS68604
LinkDB
All DBs
Position
Linear:complement(1529326..1529952)
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AA seq
208 aa
AA seq
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MAAPIRYHEGDISAEDAARYTGAIAIDTETLGLVPRRDRLCVVQLSPGDGTADVIRIAAG
QRQAPNLVRMLADPARQKIFHYGRFDIAVLFHTFGVTTTPVFCTKIASRLTRTYTDRHGL
KDNLKEMLEVDISKAQQSSDWAAETLSPAQLEYAASDVLHLHALRDKLTGRLVRDGRLDH
ADACFAFLPTRAKLDLLGWEETDIFAHS
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacccatccgttaccacgaaggcgatatttccgccgaagatgccgcgcgttac
accggcgccatcgcaatcgatacggaaacgctgggactggtgccgcgccgcgaccgcctc
tgcgtcgttcagctttcgccgggcgacggcacggcggacgtcattcgcatcgccgccggc
cagaggcaagcgcccaacctcgtgcggatgcttgccgaccccgcccgccagaagattttt
cactatggccgtttcgatatcgccgtcctgttccacaccttcggcgtgacgaccacgccg
gtcttctgcaccaagatcgcctcgcggctgacccgaacctatacggaccggcacgggctg
aaggataacctcaaggaaatgctggaagtcgatatttccaaggcccagcaatcttccgac
tgggcggcagagaccctgtcgccggcgcagctcgaatatgccgcctccgacgtgctgcac
ctgcacgcgctgcgcgacaagctgacaggtcgtctcgtgcgtgacggccgcctcgaccat
gccgacgcctgtttcgcctttctgccgacccgcgcgaagctcgacctcctcggctgggag
gaaaccgatattttcgcccatagctga
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