Agrobacterium leguminum: CFBP4996_28570
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Entry
CFBP4996_28570 CDS
T09300
Name
(GenBank) DeoR/GlpR family DNA-binding transcription regulator
KO
K20271
DeoR family transcriptional regulator, repressor of opine catabolism and conjugal transfer
Organism
aleg
Agrobacterium leguminum
Pathway
aleg02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
aleg00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CFBP4996_28570
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aleg03000
]
CFBP4996_28570
Transcription factors [BR:
aleg03000
]
Prokaryotic type
Helix-turn-helix
DeoR family
CFBP4996_28570
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DeoRC
HTH_DeoR
HTH_11
HTH_20
HTH_5
GntR
HTH_IclR
MarR
Mga
HTH_36
MarR_2
DUF7342
DUF4423
HemN_C
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WFS69693
LinkDB
All DBs
Position
pTiCFBP4996:complement(413171..413944)
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AA seq
257 aa
AA seq
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MFNSTQDRQAKIVELLRGEQFLSIGKLTDHFQISVATARRDLSELHEAGLLRRTHGGAVS
VSQVAQDKPNAARAVSHQAEKAVIAAAAAAMINDGDAVLLDAGTTALEVAKQISGRAGLT
LISNGADIIAELIRGETQNVYSVGGEYTETNRSFRGPLAEQFIRQFNVDKLILNASSIDL
DRGLICTASPLNASVQKAMVEVASRVIVVADHSKFTKSSLSVTARIEDVGVIVTDAGARS
IIETVPEKLRKKFVIAN
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaactcgacacaggaccgtcaggctaaaatcgtcgagctgttgcgaggcgaacag
tttctgtccatcgggaaactaaccgaccacttccagatttcagtggcgactgcccggagg
gacctgagcgaactccatgaggccggtcttctgcgccggacacacggcggagcggtcagc
gtttcccaggtcgctcaggataaaccgaacgcggctcgagcggtttcgcaccaggccgag
aaagcggttatagctgcggcggccgcagcaatgataaatgatggcgacgctgttctgtta
gatgctggcaccactgccctagaagtcgcaaagcaaatttcagggcgcgccggcctgacg
ctgatttcgaacggcgcagacatcattgccgaactgatccgaggcgaaacgcaaaacgtc
tattcagtcggcggtgagtataccgaaaccaaccggtccttcagaggtccgctcgccgag
cagttcattcgacagttcaatgtcgacaagctgatcctcaatgccagctcgatcgatctg
gatcggggactgatctgcacggcgtcgccactgaacgcgagcgtccagaaggcgatggtc
gaggtcgcaagccgcgtcattgtcgttgcggatcattcaaagttcacgaaatcgagcctc
tcggtgaccgccaggatagaggacgtcggggtgatcgtcaccgatgccggcgcccgaagc
atcatcgagacagtaccggaaaagctgcggaagaagttcgtaatcgcgaactag
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