Aquirufa lenticrescens: G9X62_06770
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Entry
G9X62_06770 CDS
T08551
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase subunit beta'
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
alen
Aquirufa lenticrescens
Pathway
alen03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alen00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G9X62_06770 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alen03021
]
G9X62_06770 (rpoC)
03400 DNA repair and recombination proteins [BR:
alen03400
]
G9X62_06770 (rpoC)
Enzymes [BR:
alen01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G9X62_06770 (rpoC)
Transcription machinery [BR:
alen03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G9X62_06770 (rpoC)
DNA repair and recombination proteins [BR:
alen03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G9X62_06770 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Apocytochr_F_C
RPOC_hybrid
Biotin_lipoyl_2
NQRA_N
Hpt
PRESAN
Motif
Other DBs
NCBI-ProteinID:
UAJ14281
LinkDB
All DBs
Position
complement(1488950..1493281)
Genome browser
AA seq
1443 aa
AA seq
DB search
MSFKKTRKLNSDFQKVTISLASPESILEGSNGEVTQPETINYRTYKPEMGGLFCERIFGP
TKDWECHCGKYKRIRYKGIICDRCGVEVTEKKVRRERMGHIELVVPVAHIWYFRSLPNKI
GYMLGLSTKKLDQVIYYERFVVVQPGMYAEEGKIGSQYLDFLTEDEYLDILDKLPRENQH
LPDEDPQKFIAKMGADALNMLLSRIDLDSLSADLRHSADTESSQQRKAEALKRLKVVEAF
RESIGRIDNRPEWMIIKMVPVIPPELRPLVPLDGGRFATSDLNDLYRRVIIRNNRLKRLI
EIKAPEVILRNEKRMLQEAVDSLFDNSRKVNAVRSEGNRALKSLSDMLKGKQGRFRQNLL
GKRVDYSGRSVIVVGPELKMHECGLPKDMAAELFKPFVIRKLIERGIVKTVKSAKKIVDR
KDPVVWDILENVMKGHPVLLNRAPTLHRLGIQAFQPKLIEGKAIQLHPLTCTAFNADFDG
DQMAVHVPLGHEAILEASLLMLASHNILNPANGAPITVPSQDMVLGLYYVTKGRKSTPDH
KVEGEGHRFYGFEEVVIALNEKKLSKHANIVVKATVRKEDGTLVQEMVETVAGRVLFNLC
VPEQVGYINELLTKKKLQQIISHVHKICGMARTAQFLDDIKELGFQQAFHGGLSMGIGDV
QIPAEKASLVKKAQDDVQAVWDNYLMGLITDNERYNAVIDIWTKVNSKITETLMKQMEED
NQGFNAIYMMMHSGARGSREQIRQLGGMRGLMAKPQKNLQGSVGEIIENPILSNFKEGLD
VLEYFISTHGARKGLADTALKTADAGYLTRRLHDVAQDVIVNEEDCGTLRGIEVFPLKDN
EEIIEPLSERILGRVSIHDVYDPITNELIVASGDEINEAIATKIDETAIESVEIRSVLTC
ETQSGVCAKCYGRNLATAAMVNLGEAVGVIASQSIGEPGTQLTLRTFHVGGTAQNVSLDA
SVKAKFDGVINFEEVRSVSSTDADGNPVEIVMGRSGEVQIVNPANKQILISSNIPYGSFL
RVKEGQAVKKGDEICAWDPYNAVILSEAEGKIEFEAIEENNTYKEEADEQTGMREKVIVE
SKDKTKNPSVLVKAKGKEDLVYNVPVGARLAIDEGDKIKAGQIIAKIPRAAGKTRDITGG
LPRVTELFEARNPSNPAVVTEIDGVISYGVIKRGNREIIVTPKEGAERRYLVPLTRFILV
QNNDFVRAGSPLSDGAITPSDILKIKGPTAVQEYLVNEIQDVYRLQGVKINDKHIECIVR
QMMQKVQILEPGDTQFLQGQNVDRFVFRHENDLILDQKVITDAGDSEKYKAGMILSARAL
RDENSSLKRRDMKLMKVRDAQAAVSSSNLQGITQASLGTESFISAASFQETTKVLSEASI
RAKVDTLDGLKENVIVGHLIPAGTGLRRYKDILVTSKDELKAMEAKKEAAEIAEAKEKVE
AAN
NT seq
4332 nt
NT seq
+upstream
nt +downstream
nt
atgtcatttaaaaagactagaaagctgaatagcgatttccaaaaagtaaccatctcacta
gcctctcctgagtccatcttagaggggtctaatggcgaggtaacacaaccggaaaccatc
aactaccgtacctacaaacccgaaatgggcggtttgttttgcgagcgtatcttcggtcct
acaaaggactgggagtgccattgcggtaaatacaagcgtattcgttacaaaggcatcatt
tgcgatcgctgtggtgtagaagtaacggagaaaaaagtacgtcgtgagcgtatgggccac
atcgaattagtggttccagtagcacacatctggtacttccgtagcttaccgaacaaaatc
ggttatatgctaggtttatctacgaagaaattagaccaagtaatttattacgagcgtttc
gtggtagttcaaccgggtatgtacgcggaagaaggaaagattggtagccaataccttgat
ttcttaacagaagacgagtacttagatatcttagacaaattaccgcgcgagaaccaacat
ttacctgatgaagatccacagaaattcatcgcgaaaatgggtgctgacgcgttaaatatg
ttattatctcgcattgacttagacagcttatcggctgacttgcgtcactctgcagacact
gaatcatctcaacaacgtaaggctgaagccttgaagcgtttgaaagtggtagaagcgttc
cgtgagtcgatcggtcgtatcgataaccgtcctgagtggatgatcatcaaaatggttcca
gtaattccaccagaattacgtccattggtgccattagatggaggtcgttttgcgacatct
gacttgaacgacttataccgtcgtgtgattatccgtaacaaccgtttgaagcgtttgatc
gaaatcaaagcgccagaggtaatcttacgtaacgaaaaacgtatgttgcaagaagctgta
gatagcttatttgacaactcacgtaaagtaaatgcggttcgttctgaaggtaaccgtgcc
ttgaagtctctttctgatatgttgaaaggtaagcaaggtcgtttccgtcaaaacttatta
ggtaagcgtgtcgattattcaggtcgttcggttatcgtggtaggtccagaattgaaaatg
cacgagtgtggtcttccgaaggatatggcggcagaattattcaagccgtttgttatccgt
aagttgatcgagcgtggtatcgtgaagacggttaagtctgcgaagaaaattgttgatcgt
aaggatccagtggtttgggatattttggaaaatgtaatgaaaggacacccagttctttta
aaccgtgctcctacccttcaccgtttaggtatccaagctttccaaccgaaattaatcgaa
ggaaaagcgatccaattgcacccattaacttgtacggcatttaacgccgatttcgatggt
gaccagatggcggttcacgttccactaggacatgaagcgattttggaagcctcgttatta
atgcttgcatcacataacatcttgaacccagcgaatggtgcgcctattacggtaccatct
caggacatggtgttaggtttatattatgtaactaaaggacgtaagtcaactccagaccac
aaggtagagggagaaggacaccgtttctacggatttgaggaggttgtaatcgccttgaac
gagaagaaattgtctaagcacgcgaacatcgtagtgaaagctaccgttcgtaaggaagac
ggtacattagttcaagaaatggtggaaactgttgctggacgtgtattattcaacttatgt
gttcctgagcaagtaggttacatcaatgagttattgactaagaagaaattgcaacaaatc
atctcacacgttcacaagatctgtggtatggctcgtacagcgcaattcttagatgatatc
aaagaattaggtttccaacaagccttccacggtggtttatcgatgggtattggtgatgtt
caaattccagctgagaaagcttccttagtgaagaaagcacaggatgatgttcaagcggtt
tgggacaactacttaatgggtttaatcacagataacgagcgttacaatgcagttattgac
atctggacaaaagtgaactcgaaaattaccgagacattgatgaagcagatggaagaggat
aaccaaggatttaacgcgatctatatgatgatgcactctggagcccgtggttctcgtgag
caaattcgtcaactaggtggtatgcgtggtttgatggcgaaacctcaaaagaacttacaa
ggttcagtaggtgaaatcatcgaaaacccaatcctttctaactttaaagaaggtcttgac
gtattagagtactttatctcaactcacggtgcgcgtaaaggtttggcagatactgccttg
aaaacagccgatgcgggttacttgactcgtcgtctacacgacgtagcacaagacgttatc
gtgaacgaagaagattgcggtaccttacgtggtatcgaggtgttcccattgaaagacaat
gaggagatcatcgagccattatctgagcgtatcttaggtcgtgtatctattcacgatgta
tatgatccaatcacaaatgagttaatcgtagcttctggtgatgaaatcaacgaggcaatc
gcaacgaaaattgatgagacagcgatcgagtcagtagaaattcgttcggtattaacttgt
gaaacgcaaagcggtgtttgtgcgaaatgttacggacgtaacttagcgacagctgcgatg
gtgaacttaggggaagcggtaggtgtaattgcctctcaatcgattggtgagccaggtact
cagttaacgttacgtacgttccacgtgggtggtacggcacaaaacgtttccttagatgca
agcgttaaagcgaaatttgacggggtgattaacttcgaagaggttcgttctgtaagctct
acagatgcagatggaaatccagtagaaatcgtgatgggtcgttctggtgaagttcaaatt
gtgaacccagcgaacaaacaaatcttgatctcttctaacattccttatggttcattctta
cgcgttaaggaaggccaagcggtgaaaaaaggagacgaaatctgtgcttgggatccatac
aatgcggtaatcctttctgaagctgaaggtaaaattgagttcgaggcaatcgaagaaaac
aatacctacaaagaggaagcagatgagcaaacaggtatgcgtgagaaggtcattgtagaa
tcgaaagataagacaaagaacccatccgtattagtaaaagcaaaaggtaaagaagattta
gtatacaacgttccagtaggtgcgcgtttagcgatcgacgaaggagataaaatcaaagcg
ggtcaaattatcgctaagattcctcgtgcggcaggtaaaacacgtgacattacgggtggt
cttccacgtgttacggaattattcgaagcacgtaacccatctaacccagccgttgtaacg
gagatcgatggggtaatttcttacggtgtaattaagcgtggtaatcgcgagattatcgtg
acaccgaaagagggagctgagcgtcgttacctagtacctttaacacgattcatcttagta
caaaataatgacttcgtgcgtgcaggttctccactttctgatggtgctattacaccttca
gatatcttgaagatcaaaggacctacagcggtacaagaatacttagtgaacgagatccaa
gacgtataccgtctacaaggtgtgaagatcaatgataagcacatcgagtgtatcgttcgc
caaatgatgcaaaaagttcagattttagagccaggtgatacgcaattcttacaaggtcaa
aacgtagatcgtttcgtattccgtcacgagaacgacttgatcttagatcagaaagtgatc
actgacgctggagattctgagaaatacaaagcaggtatgattctttctgctcgtgctttg
cgtgatgagaactcttcgttaaaacgtagagatatgaagttaatgaaggtccgtgatgcg
caagcagccgtttcttcttctaacttacaaggtatcacgcaagcgtcgttaggaacggaa
tcattcatctccgctgcatcgttccaggaaactacgaaagtactttctgaagcgtcgatt
cgcgcgaaagtagatacgctagacggcttgaaagagaacgttatcgtaggtcacttgatt
ccagcaggaacaggtcttcgtcgctacaaggacattttagtcacatcgaaagatgagcta
aaagcaatggaagcgaagaaagaagctgcagaaatcgctgaagcgaaagaaaaagtagaa
gctgcaaactaa
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integrated database retrieval system
