Aquirufa lenticrescens: G9X62_10115
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Entry
G9X62_10115 CDS
T08551
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
alen
Aquirufa lenticrescens
Brite
KEGG Orthology (KO) [BR:
alen00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alen03032
]
G9X62_10115 (topA)
03400 DNA repair and recombination proteins [BR:
alen03400
]
G9X62_10115 (topA)
Enzymes [BR:
alen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G9X62_10115 (topA)
DNA replication proteins [BR:
alen03032
]
Prokaryotic type
DNA Topoisomerases
G9X62_10115 (topA)
DNA repair and recombination proteins [BR:
alen03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G9X62_10115 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
UAJ14909
LinkDB
All DBs
Position
2262811..2265300
Genome browser
AA seq
829 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEGYLGKDFVVKSSFGHVRDLPLKGDKAIDVENDFAPTYVVSAD
KTKVISELKSLAKSSEEVWLATDDDREGEAISWHLKEALGLKDNAKRIVFREITKPAILQ
AITQPRTIDMDLVNAQQARRIMDRLIGFELSPVLWSKVQKGLSAGRVQSVAVRLIVERER
EIENHEAVATFKVVAHFDLPGKKVLKAELSKAFAKENDALDFLKKCVGAAFSIKSLETKP
AKKSPAPPFTTSTLQQEASRKLGFAVATTMSVAQKLYESGRITYMRTDSTMLSQEARDKA
KAEIESAYGAKFHYSRQFKTKSESAQEAHEAIRPTDFANHSITGDAREKRLYELIWKRAI
ASQMADALIERTTALIDISTTPELLSAQGEVIAFEGFLKAYLEGKDDEDEDENKDMLPPL
NVGQVLTLDEMKAQERFTRAAPRYTEASLVKALEEKGIGRPSTYAPTISTIIKRAYVVKE
DRPGREREFQTWVLSNNEISGTKATETVGTEKSKLFPTHIGTLVTDFLVENFENVVDYTF
TAEMEDEFDNIAKGKLEWTVLMKNFYKSFHQTIEDSKSINRSSVGGGRELGVDPKTGRLV
SVRLGKFGPFVQLGESSEEEKPVFANLTKTQAVSTLTFEEALALLERPKLPREVGIHNDM
PVIIGAGKLGPYIKYDGKFTSLPDTHDPFTIEMDQAIAVIAQALKDAEAGGLGYFEDSLI
ETGKGRFGPYVKHNGKYYSLAKTDNLATIDQARAIELIEAKRKVEANKFIKEFAENESVK
VVNGMYGPYIQIGKRNVKIPKGTEPADLTLEECLALGDAAPAPKKARKK
NT seq
2490 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaaaatttagtcatcgttgagtctcctgcgaaagcgaagaccatagaaggatat
ttgggaaaggatttcgtggtgaagtcttcttttggtcacgtacgcgatttgcctttaaaa
ggagataaagccattgatgtggagaacgacttcgctcctacctatgtggtatcggcggat
aagacaaaggtcatttctgagttaaaaagtttagcgaaatcatcggaggaagtgtggtta
gcaacggacgatgaccgggaaggagaagccatttcttggcacttaaaagaagctttaggg
ttaaaagataacgcgaaacggattgttttccgtgaaattacgaaaccagccattttgcaa
gccattacgcagccacgtaccattgatatggatttagtgaatgcgcagcaggcacgccgg
attatggaccgtttgattgggtttgaattatcacctgtgctttggtctaaagtacaaaaa
ggtttatctgctggccgtgtgcaatctgttgcggttcgtttgattgtagaacgtgagcgt
gaaattgaaaatcacgaagcggtagctacttttaaagtagtggctcattttgatcttcca
ggtaaaaaggtattaaaagctgaattgtcgaaggcatttgccaaagaaaatgatgcatta
gacttcttgaaaaaatgtgtaggcgctgcgttcagcatcaaaagcttagaaacgaaaccg
gcgaaaaaatcacctgcacctccatttacaacgtctaccttacaacaagaggcttctcgt
aaattaggttttgcggtagctacgaccatgtctgtcgctcaaaaactctacgaatcaggt
cgtattacgtatatgcgtaccgattctacgatgttatcgcaagaagcaagagataaagcg
aaggcggaaattgaatcagcttatggcgctaagttccactacagtcgtcagtttaagacc
aaatctgaaagcgcacaagaagctcacgaagccattcgtccgacagattttgccaatcac
agcatcacaggtgatgcgcgtgagaagcgtttatatgagttaatttggaagcgcgccatc
gcctctcaaatggcggatgccttaattgagcgcacgaccgctttaattgatatttcaacg
acacctgagttgttatcagcacaaggtgaagtgattgcctttgaaggtttcttgaaggcc
tatttagaaggaaaagatgacgaggacgaggatgagaacaaagatatgttgccacctttg
aacgtcggacaagtgttgacattagatgaaatgaaggcccaagagcgttttactcgtgct
gcgccgcgttatacggaggcaagtttagtgaaagctttggaagaaaaaggaatcggtcgt
ccttcgacctatgctcctaccatttctaccattattaagcgtgcctatgtggtgaaagaa
gatcgtccaggtagagagcgcgaattccaaacttgggtactttcaaataacgagatttcg
ggaacgaaagcaacagaaacagtgggtacggaaaagtcaaaattattccctacacacatc
ggaacactcgtaacagatttcttagttgaaaacttcgaaaatgtagtcgattatacgttt
accgcggagatggaggatgaatttgataacatcgccaagggtaaattagagtggacggtc
ttgatgaaaaacttctacaagtctttccatcaaacgattgaagattctaaatccattaac
cgcagttctgtgggtggtggacgtgaattgggtgtagatcctaagacagggcgtttagtt
tcggttcgtttagggaaatttggcccatttgtacagttaggtgaatcttctgaggaagaa
aaaccagtctttgcaaatttaacgaagacacaagcagtaagtacgttgacttttgaagaa
gctttggccttgttagaacgccctaaattgcctcgcgaagtgggaattcacaacgatatg
ccagtgattattggtgctggaaaattaggtccttacattaaatatgatggcaaatttacg
agtttgcctgatacacacgatccattcacgattgaaatggatcaagcgattgcggtcatt
gcccaagcattgaaggacgcggaagctggtggtttaggatactttgaagattccttgatt
gagaccggtaaaggccgttttggtccttatgtgaagcacaatggcaagtattattcttta
gcgaaaacagataatttagccaccattgatcaagcgcgtgccatcgaattaatcgaagca
aagcgtaaagtggaagcgaataaattcattaaggaatttgcagagaatgagtctgttaag
gtagtgaacggcatgtacggtccgtatatccaaatcggaaaacgcaacgtgaagatccct
aaaggaacggaacctgctgatttaaccttagaggagtgtttagccctaggtgacgcggct
ccagcccctaaaaaagcacgtaaaaaataa
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