Aquirufa lenticrescens: G9X62_11140
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Entry
G9X62_11140 CDS
T08551
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
alen
Aquirufa lenticrescens
Pathway
alen03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alen00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
G9X62_11140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alen03019
]
G9X62_11140
03009 Ribosome biogenesis [BR:
alen03009
]
G9X62_11140
Enzymes [BR:
alen01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
G9X62_11140
Messenger RNA biogenesis [BR:
alen03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
G9X62_11140
Ribosome biogenesis [BR:
alen03009
]
Prokaryotic type
rRNA helicases
G9X62_11140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
Cas3-like_C_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
UAJ15101
LinkDB
All DBs
Position
complement(2485923..2487743)
Genome browser
AA seq
606 aa
AA seq
DB search
MSEKIRFDSLPLSEGIQEAVKEMGFEFASPIQSEAIPFVMEGRDVIGQAQTGTGKTAAFG
IPMIEHIVPFEKYVQAIILCPTRELAVQVSEEMKKLSKFTKGVWVTTVYGGDSIDRQIKS
LKAGANIVVGTPGRVIDLIERRALKLNQTSMIVLDEADEMLDMGFREDIESILEEIPNER
QTVLFSATMSKPIMALTNRYLTNPKLVKVVKNEITNVNIEQLYYDVKGRAKMEVTTRLID
FYSLKLVLIFCNQKKRVDEVVEELMLRGYAAEGLHGDLRQSQRTQVMNRFRGGNVSFLVA
TDVAARGLDVDNVDAVINYDIPLDEEYYVHRIGRTGRAGKSGKAFTLVVGAERNRLRDIM
NYTKVKIDKGVIPTFSDVVGVKKGMFIDRVGATIAEGGLELFDDALPNFQHAGFTVEQVV
AALVKMNMGVVKNEFGDENLEGDMERSSRKYGRDERGGGGRFERGGGGDRWGGGDRGGDR
RGAGRFERGGDRGGDRGGRFERGGDRNSAPRGPRVDRDGKPYKSDENMVRLVVNIGFNEK
ISPSNIVGAFAGESGIPGNVLGQIQIENKHTFVDVPKEYANVVLDKMSGAQIKGKRVNVD
IAKADK
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaaaaattcgcttcgattcgcttccattgtcggaaggaatccaagaagcagta
aaagaaatgggctttgagtttgcttctcccatccaatcagaagcaattcctttcgtcatg
gaaggtcgtgatgtcatcggtcaagcacagacaggtactggtaaaacagccgcgttcggt
attccgatgattgagcatattgttccttttgagaagtatgttcaagcaatcatcttatgt
cctacgcgtgaattagcggttcaagtttctgaggaaatgaagaagttgtctaagtttacg
aagggtgtttgggtgacgacggtatatggtggtgattccatcgatcgtcaaattaagtcc
ttgaaagcaggggctaacatcgtggtgggaacaccaggtcgtgtcatcgacttaatcgaa
cgtcgtgcgttgaaattaaatcaaacatcgatgatcgttctagatgaggcggatgagatg
ttagatatgggtttccgcgaggatatcgaaagtattttggaagaaattccgaatgagcgt
caaacagtcttgttctctgcaaccatgtctaagccaattatggccttgacaaaccgttat
ttaactaaccctaagttagtgaaggtggttaagaatgagattacgaacgtaaacatcgag
caattatactacgatgtgaagggccgtgcgaaaatggaagtgacgactcgtttgatcgac
ttctattccttgaaattggtcttgattttctgtaaccaaaagaaacgtgtagacgaagtg
gtggaagaattgatgttgcgtggatatgcggctgaaggtcttcacggtgacttacgtcaa
tcacaacgtacccaagtaatgaatcgtttccgtggtggaaatgtcagtttcttagtggct
actgatgtggcggcacgtggtttggacgtagataacgtggatgccgtaatcaattacgat
attccattagatgaagaatattacgtacaccgtatcggtcgtacaggtcgtgccggaaag
tctggtaaggcatttacgttagtcgtaggagctgaacgcaatcgtttgcgtgatatcatg
aactatacgaaagtaaagattgataaaggagtgattcctacgttctctgacgttgtaggt
gtgaaaaagggtatgtttattgatcgggtaggtgctacaatcgctgaaggcggtttagag
ttattcgatgatgcattacctaatttccaacatgctggtttcactgtggagcaagtagtg
gctgcgttagtgaaaatgaacatgggtgtcgtgaagaacgaatttggtgatgaaaatctc
gaaggcgatatggaacgtagctcacgtaagtacggtcgcgatgaacgcggtggtggcggt
cgtttcgaaagaggcggtggcggtgatcgttggggtggaggagaccgtggcggagatcgc
cgtggtgctggccgtttcgaaagaggtggtgatcgtggcggagaccgcggtggtcgtttc
gaaagaggcggtgatcgtaattcagctcctcgtggacctcgtgtagatcgcgatggtaag
ccttacaaatcagatgagaatatggtacgtctagtggttaacatcggatttaacgaaaaa
atctctccatcgaacatcgtgggagcttttgccggagaatcaggtattccaggaaacgta
ttaggtcaaattcaaattgagaacaaacacacgtttgtggatgtaccgaaagaatatgcg
aatgtcgtattagacaaaatgagcggcgcccaaatcaagggtaagcgagtgaatgtcgat
attgcgaaagcagacaaataa
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