Agrobacterium larrymoorei: CFBP5473_00295
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Entry
CFBP5473_00295 CDS
T06268
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alf03016
]
CFBP5473_00295 (truB)
Enzymes [BR:
alf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
CFBP5473_00295 (truB)
Transfer RNA biogenesis [BR:
alf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
CFBP5473_00295 (truB)
Prokaryotic type
CFBP5473_00295 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Zf-C2H2_ZNF451_5th
Motif
Other DBs
NCBI-ProteinID:
QCI96499
UniProt:
A0A4D7DQ29
LinkDB
All DBs
Position
circular:complement(57741..58688)
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AA seq
315 aa
AA seq
DB search
MSKPRKQQNRKPKGRPISGWLILDKPFDFGSTEAVSKIKWLFNAQKAGHAGTLDPLASGM
LPIALGDATKTVPYVMDGRKIYEFTVSWGEERTTDDMEGEVLNTSDTRPSEQDVRDLLSK
YTGTILQIPPQFSAIKIAGERAYDLAREGEIVEIPAREVEVHRLTLLACPDENTAHFEVE
CGKGTYVRALARDMGRDLGCYGFISELRRSMVAPFAEDVMVPLEKLTELETIEDRDERLA
ALDAYLIDTSEALSSLPHLIINDDQAHRLKMGNPILLRGRDAPTQESEAYATARGRLIAI
GEIGQGEFRPKRVFG
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaaccacgcaaacagcagaaccgcaaacccaagggccgcccgatttccggttgg
ctcatcctcgacaagccgttcgacttcggctccaccgaagccgtttccaagatcaagtgg
cttttcaacgcgcagaaggcaggccacgccggaacgctcgatccgctcgcctccggcatg
ctgccgattgcgctcggcgatgccacaaagaccgtgccttacgtcatggacggtcgcaag
atttacgagttcaccgtcagctggggtgaagagcgcacgacggacgatatggaaggggag
gtcctcaacacctccgacacccgtccgagcgagcaggatgtccgtgatctcttgtcgaaa
tataccggcacgatcctccagatcccgccgcagttttccgccatcaagattgccggtgag
cgcgcctatgatctggcccgcgagggtgagatcgttgaaatacccgctcgtgaagtcgaa
gttcatcgcctgacgctgctggcatgcccggatgagaataccgcgcatttcgaagtggaa
tgcggcaagggcacctatgttcgtgcgctggcgcgtgacatgggtcgcgatctcggctgc
tacggtttcatttccgagttgcggcgctccatggtcgcgccctttgccgaagacgtgatg
gtgccgctggaaaagctgacggaactggaaaccatcgaagaccgcgacgagcgcctcgca
gctctcgacgcttacctcatcgatacgtccgaagccctgtcctcactgccgcatctgatc
atcaatgatgatcaggcgcatcgcctgaaaatgggcaatcccatcctgctgcgtggtcgc
gatgcgccgacgcaggaatcggaagcctatgctaccgcgcgcggcaggctgatcgcgatt
ggcgagatcggtcagggcgagttccgtcccaagcgcgtcttcggctga
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