Agrobacterium larrymoorei: CFBP5473_00550
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Entry
CFBP5473_00550 CDS
T06268
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03030
DNA replication
alf03410
Base excision repair
alf03420
Nucleotide excision repair
alf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CFBP5473_00550 (polA)
03410 Base excision repair
CFBP5473_00550 (polA)
03420 Nucleotide excision repair
CFBP5473_00550 (polA)
03440 Homologous recombination
CFBP5473_00550 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alf03032
]
CFBP5473_00550 (polA)
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_00550 (polA)
Enzymes [BR:
alf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CFBP5473_00550 (polA)
DNA replication proteins [BR:
alf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
CFBP5473_00550 (polA)
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
CFBP5473_00550 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CFBP5473_00550 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
HHH_2
HHH
IMS_HHH
Transposase_20
Motif
Other DBs
NCBI-ProteinID:
QCI98982
UniProt:
A0A4D7DXR4
LinkDB
All DBs
Position
circular:111580..114570
Genome browser
AA seq
996 aa
AA seq
DB search
MKKGDHLFLVDGSGFIFRAFHAIPPLNRKSDGLPVNAVSGFCNMLWKLLKDARNTDVGVT
PTHFAVIFDYSSKTFRNELYDLYKANRSAPPEDLVPQFGLIRHATRAFNLPCIETEGFEA
DDIIATYARQAEAIGADVTIISSDKDLMQLVTPNVHMYDAMKDKQIGVPDVVEKWGVPPE
KMIDLQAMTGDSTDNIPGIPGIGPKTAAQLLEEYGDLDTLLSRAGEIKQQKRRENIIANA
ELARLSRQLVALRTDVPLELALDALTLEPQDGPKLIAFLKAMEFTTLTRRVAEATGADAS
AIDPAHVPVERGAEAHGPDLDAIAGSADEAGVPLGENSVSDVGAVLSKAEGDTPKELASA
REATFSAAKIDTTAYQTIRTIEELDRWVAMARETGVVAFDTETTSLDPMNAELVGFSLAI
ADNSKNASGSDIIAAYVPLTHKTGSGGDLFSDGIKLAPDQIPYDLAIERLKALLEDPAVL
KVAQNLKYDYLLVKRLGIVMQSYDDTMLLSYVLEAGKGAHGMDALSERWLGHTPIPYKDV
AGSGKSGVTFDFVDIDKATAYAAEDADVTLRLWMVLKPRLVADRLTTVYERLERPLVPVL
AHMEERGISVDRQILSRLSGELAQKAAAFEEEIYELAGEKFNIGSPKQLGDILFGKMGLP
GGSKTKTGQWSTSASVLEDLAAEGMELPRKIVDWRQLTKLKSTYTDALPGYIHADTKRVH
TSYSLASTTTGRLSSSEPNLQNIPVRTAEGRKIRTAFISTPGNKLLSADYSQIELRVLAH
VADIPQLKNAFENGIDIHAMTASEMFGVPVEGMPSEVRRRAKAINFGIIYGISSFGLANQ
LSIGRSEAGDYIKKYFERFPGIRDYMENTKAFARENGYVETIFGRRVNYPEIKSSNPSVR
AFNERAAINAPIQGSAADIIRRAMIRMEPALDEAKLSARMLLQVHDELIFEVEESEIEKT
LPVVVSIMENAAMPAIDMKVPLQVDARAADNWDEAH
NT seq
2991 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaaaggcgatcatctcttcctcgtggacggctccggtttcatcttccgggcgttc
catgccatccctccgctcaaccgcaaatcagacggtttgccggtcaatgccgtgtccggt
ttctgcaacatgctgtggaagcttttgaaggatgcgcgcaataccgatgtcggggtgacg
ccaacccattttgccgtgattttcgactattcctccaaaaccttccgaaacgagctttac
gatctctacaaggccaaccgctccgcgccgccggaagatctcgttccgcagttcggcctc
atccgccacgccacgcgcgctttcaacctgccctgcatcgagacggaaggtttcgaagct
gacgatatcatcgccacctacgcccgccaggcggaagcaatcggcgcggatgtgaccatc
atctcctccgacaaggatttgatgcagctcgtcacgccgaatgtgcatatgtacgacgcg
atgaaggacaagcagatcggcgttcccgatgtcgtcgagaaatggggcgtgccgcctgaa
aagatgatcgaccttcaggcgatgacaggcgattcgaccgataatattccgggcatcccc
ggcatcgggcctaagacggcggcgcaattgctggaagaatatggcgatctcgatacgctg
ctttcacgcgctggggaaatcaagcagcagaagcgccgtgaaaacatcatcgccaatgcg
gaactggcgcgtctttcccgccagctcgtcgcgctgcgcacagatgttccgctggagctt
gctctggatgcactgacgctcgagccgcaggacggcccgaagctgatcgccttcctgaag
gccatggaattcaccacactgacgcgccgcgtggccgaagcgaccggagcggatgcctct
gccatcgaccccgcgcatgttcctgtcgagcgtggcgcagaagcacacgggcccgatctg
gatgcaatagcgggctcggcagacgaggctggggttccgcttggcgagaattcggtttcg
gatgtcggtgccgttctttccaaggcagaaggcgacacgccgaaagagcttgcatctgcc
cgcgaagcgacattctccgctgcaaagatagacacgacagcctatcagaccatccgcacc
attgaagaactggatcgctgggtcgccatggcgcgcgaaaccggcgtcgtcgctttcgat
accgaaacgacatcgctcgacccgatgaatgccgaactggtgggtttttcgctggcgatt
gccgataacagcaagaacgcgagcggttccgatattatcgcggcctatgtacccctcact
cacaagaccggctccggtggcgatctgttcagcgatggcatcaagctggcacccgaccag
attccttacgatcttgcgatcgagcggctgaaggcgcttctggaagaccccgccgttctg
aaggtcgctcagaacctgaaatatgattacctgctggtgaaacgtctcggcattgtcatg
cagagctatgacgacacgatgctgctgtcttacgttctggaagcgggcaaaggcgcgcat
ggaatggatgcgctctcggaacgctggctcggacacacgccgatcccttacaaggatgtc
gcgggctccggcaaatccggcgtcaccttcgatttcgtggatatcgacaaggcgactgcc
tatgccgccgaagatgccgatgtcacgcttcgcctctggatggtgctgaaacctcgtctc
gtggcagatcgcctgaccacggtttacgagcggctggaacgcccgcttgtgccggttctg
gcgcatatggaagagcgcggcatttccgtagaccggcaaatcctctcgcgcctttcaggc
gagctggcgcagaaggccgctgccttcgaagaagaaatttacgagctcgccggcgagaaa
ttcaacatcggctcaccgaagcagcttggcgatattctcttcggcaagatgggcctgccg
ggtggctcgaagaccaagaccggccaatggtccacctccgcttctgtgctggaagacctt
gccgccgaaggtatggagctgccgcgcaaaatcgtggactggcgtcagctgaccaagctg
aaatccacctatacggatgccctccccggctatatccacgccgacaccaagcgcgtccac
acctcctattcgctggcatccacgacaacgggacgcctctcctcctccgagccgaacctc
cagaacattccggtgcgcacggcagaaggtcgcaaaatcagaacggctttcatctccacg
ccgggcaacaagctgctttctgccgattacagccagatcgagcttcgcgtgctggcgcat
gtcgctgacattccgcagctgaagaacgctttcgaaaacggcatcgatattcacgccatg
acggcatccgaaatgttcggcgtgccggtggaaggcatgccgtccgaagtgcgtcgccgc
gccaaggccatcaacttcggcatcatctacggcatctcctctttcggccttgccaaccag
ctgagcattggccgctcggaagcgggcgattacatcaagaagtatttcgaacgcttcccc
ggcattcgcgattatatggaaaacaccaaggctttcgcgcgcgaaaacggctatgtcgaa
accatcttcggtcgccgggtgaattaccctgaaatcaagtcgtccaatccatcggtgcgc
gccttcaacgaacgcgccgccatcaacgcaccgatccagggctccgccgccgacatcatt
cgccgcgccatgatccgcatggaacctgcccttgatgaggcaaagctttcggcccgcatg
ctgcttcaggtacacgacgaacttatcttcgaagtcgaggaaagcgagatcgagaagacc
ctgcccgtcgtggtctccatcatggaaaacgccgccatgcccgccatcgacatgaaggtg
ccgttgcaggtggatgcccgcgctgcagacaattgggatgaggcgcattga
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