Agrobacterium larrymoorei: CFBP5473_01560
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Entry
CFBP5473_01560 CDS
T06268
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CFBP5473_01560
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
alf03019
]
CFBP5473_01560
Messenger RNA biogenesis [BR:
alf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
CFBP5473_01560
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
QCI96718
UniProt:
A0A4D7DLE7
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Position
circular:complement(340693..341205)
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AA seq
170 aa
AA seq
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MTIKAEDLPYRPCAGIMVLNSKGLVWAGRRISQGNSEFDGSPQLWQMPQGGIDEGEKPLT
AAIRELYEETGMKTVTLLAEARDWIHYDLPPQLIGIGLRGKYRGQAQRWFAFRFDGDESE
IQIDPPPGNHEAEFDAWDWKPMESLPELIVPFKRAVYEQVVAEFRHLAAN
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
atgacgatcaaagcagaagatctgccataccgcccctgcgccgggataatggttctgaat
tcgaagggactggtctgggcgggacgccggatttcacagggcaactccgaattcgacggt
tcaccgcaactctggcaaatgccgcagggcggcatcgatgagggcgagaagccgctgacg
gcggctatccgcgaactctatgaagaaacgggtatgaagaccgtcacgcttctggcggag
gcgcgtgactggatccattacgacctaccgccacaactgatcggcatcggtctgagaggc
aaatatcgcggccaggcacagcgctggttcgccttccgcttcgatggagacgaaagcgaa
atccagatcgacccaccgcccggcaatcatgaggccgagttcgatgcctgggactggaag
ccgatggaaagcctgccggagcttatcgtgcccttcaagcgggcggtctatgagcaggtc
gtcgcggagtttcgccatctggcagcaaactga
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