Agrobacterium larrymoorei: CFBP5473_02005
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Entry
CFBP5473_02005 CDS
T06268
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
alf03016
]
CFBP5473_02005 (thpR)
Enzymes [BR:
alf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
CFBP5473_02005 (thpR)
Transfer RNA biogenesis [BR:
alf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
CFBP5473_02005 (thpR)
BRITE hierarchy
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GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
QCI96798
UniProt:
A0A4D7DLL5
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All DBs
Position
circular:432535..433128
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AA seq
197 aa
AA seq
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MPRLFTALEIPRNAAMSLSLLRGGLPGARWIDVENYHITLRFIGDIDGRTADEVVYRLDQ
IDREEFQINLTGVGSFGSKKPHSIWAGVSPSPEMTALQGEIERICQRLGLPPDPRKFTPH
VTLARLRNARLDDVVHYLSGRGDFRTSPFNVGRFVLMSSKESVGGGPYIVEEAFPLHEAR
SASIFSSKELHPAKSML
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atgccgagactgtttaccgccctcgaaattccgcgcaatgcggcgatgagcctttcattg
ttgcgcggtggtctgccgggagcccggtggattgacgtggagaattatcacatcaccctc
agatttatcggagacatcgacgggcgtaccgccgatgaagtggtctatcgtctcgatcag
atcgatcgcgaggaattccagatcaatctgacgggtgtgggatcgttcggttcgaagaaa
ccccactccatctgggccggtgtctctccatcaccggaaatgacggcccttcaaggcgaa
atcgagcgtatctgccagcgacttgggcttccgccggatccccgcaaattcacgccgcat
gtaacgctcgcgcggctgagaaatgcacggctggatgatgtggtacactatctttccggt
cgaggagacttccgtacgtcgcccttcaatgtcgggcgcttcgtgctgatgtcctccaag
gaatcggtgggcggcgggccttacatcgttgaggaagccttcccgcttcacgaggcgcgc
tctgccagcatcttctccagcaaggaactacacccggcaaaaagcatgttgtag
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