Agrobacterium larrymoorei: CFBP5473_04150
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Entry
CFBP5473_04150 CDS
T06268
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alf03021
]
CFBP5473_04150 (rpoH)
Transcription machinery [BR:
alf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
CFBP5473_04150 (rpoH)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
HTH_11
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QCI97176
UniProt:
A0A4D7DS90
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All DBs
Position
circular:888314..889216
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AA seq
300 aa
AA seq
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MARNSLPSITAGEAGLNRYLDEIRKFPMLEPQEEYMLGKRYAEHGDRDAAHKLVTSHLRL
VAKIAMGYRGYGLPIGEVVSEGNVGLMQAVKKFDPDRGFRLATYAMWWIKASIQEYILRS
WSLVKMGTTANQKRLFFNLRRLKGRLQAIDDGDLKHEHVKEIATKLQVSEEEVISMNRRL
SGDASLNAPIKASEGESGQWQDWLVDDHESQETVLIEQDELDTRRRMLSKALGVLNDRER
RIFEARRLSEDPVTLEELSSEFDISRERVRQIEVRAFEKVQDAVQKEAEEAAKALRVVDA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcaatagtttgccatccattacagccggtgaagccggtctcaatcgttatctc
gatgaaattcgcaagttccctatgctggagccgcaggaagagtacatgcttggcaagcgt
tatgccgaacatggcgaccgcgatgctgcgcataagctggtaaccagccacctccgtctc
gtggcgaagattgccatgggctatcgcggttatggcctgccgattggcgaagttgtgtcc
gagggcaatgtgggcctgatgcaggcggtgaagaagttcgacccggatcgcggcttccgt
ctggcgacctacgccatgtggtggatcaaggcctctattcaggaatatatcctgcgttca
tggtcactggtgaagatgggcacgaccgcaaaccagaagcgcctgttcttcaacctgcgc
cgtttgaagggccgccttcaggccattgatgatggcgatctgaagcacgaacacgtcaag
gaaatcgcgacgaagcttcaggtctccgaggaagaagttatttcgatgaaccgccgcctc
agcggcgacgcgtctctaaatgcgccgatcaaggcttccgaaggtgaatccggccagtgg
caggattggctggtggacgaccatgagagccaggaaacggttctgatcgagcaggacgag
ctcgatacccgtcgccgtatgctttccaaggcgcttggcgtgctgaatgatcgtgagcgt
cgcattttcgaggcgcgccgtctgtcggaagatccggtgacgctggaagagctgtccagc
gagttcgacatcagccgcgagcgcgtgcgccagatcgaggttcgcgccttcgaaaaggtg
caggacgcggtacagaaggaagctgaggaagcggcgaaggcactgcgcgtagtcgacgcg
taa
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