Agrobacterium larrymoorei: CFBP5473_05030
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Entry
CFBP5473_05030 CDS
T06268
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf00521
Streptomycin biosynthesis
alf00523
Polyketide sugar unit biosynthesis
alf00525
Acarbose and validamycin biosynthesis
alf00541
Biosynthesis of various nucleotide sugars
alf01100
Metabolic pathways
alf01110
Biosynthesis of secondary metabolites
alf01250
Biosynthesis of nucleotide sugars
Module
alf_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
CFBP5473_05030 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
CFBP5473_05030 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
CFBP5473_05030 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
CFBP5473_05030 (rfbB)
00525 Acarbose and validamycin biosynthesis
CFBP5473_05030 (rfbB)
Enzymes [BR:
alf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
CFBP5473_05030 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
RmlD_sub_bind
3Beta_HSD
NAD_binding_4
adh_short
NAD_binding_8
KR
NAD_binding_10
Sacchrp_dh_NADP
Motif
Other DBs
NCBI-ProteinID:
QCI97340
UniProt:
A0A4D7DZM3
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All DBs
Position
circular:complement(1063338..1064396)
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AA seq
352 aa
AA seq
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MRVLVTGGAGFIGSALVRYLVSQKGYDVLVVDKLTYAGNISSLNDVRDNPRYRFLQADIC
NREAIKVAIETFKPDRIMHLAAESHVDRSINSAIDFIQTNIMGSFTLLEAARDFWTTLDQ
QKQKDFRFLHVSTDEVYGSLGSIGLFSETTPYQPSSPYSASKAASDHLAKAWATTYGLPV
IVSNCSNNYGPYHFPEKLIPLTILNALERKPITVYGQGANVRDWLYVDDHVRALDTIIEN
GRIGETYNVGGHNELANIDVVQQICALINKQIEGDFRHESLITYVTDRPGHDARYAIDAS
KLERELGWKPNENFETGIEKTVTWYLQNAWWWMPLRKTYQGQRLGIISSTVK
NT seq
1059 nt
NT seq
+upstream
nt +downstream
nt
atgcgagtattggtaactggtggagctggatttataggttcggcactggtcagatatctc
gtatcgcaaaagggctatgatgttcttgttgtcgataagcttacctatgcgggtaacatt
tcttcgctaaacgatgtccgcgacaatccgcgctaccgctttttacaggctgatatctgc
aatcgtgaagctatcaaagttgcgatagaaactttcaaacccgacagaatcatgcatctt
gcggctgaaagtcatgtcgacagatcgataaacagcgcaattgatttcatccagacaaac
atcatggggtccttcacgctcttggaggcagcaagagatttttggacgactctggatcag
cagaaacaaaaagactttcgctttctccatgtttcaactgatgaagtttatggctcattg
ggctcaataggcttgtttagcgagacgacgccataccaaccatcatccccttattcagcg
tctaaagcagcttccgaccatctcgccaaagcatgggctacaacatatggcttgccggtt
atcgtatctaactgttccaacaactacggtccttatcattttcccgagaagttaataccg
cttacaattctcaatgcgttagaacgaaagccgataacggtgtacggccaaggcgctaat
gtgcgtgactggctatatgtcgatgatcacgtgcgggcactggataccatcattgaaaat
ggccgcattggagagacttacaacgtcggcggccacaatgagctggcgaatatcgacgtg
gttcaacaaatttgtgcgcttataaataaacagattgagggcgactttcgccacgagagc
ctgattacttatgtgacagacagaccgggacacgatgcgcgttacgctatcgatgcgagc
aaactggaacgcgaattaggatggaagcctaacgaaaattttgagacaggtatcgaaaag
actgtgacgtggtatcttcaaaatgcctggtggtggatgcctttacgaaaaacctatcaa
gggcagaggctaggcattatttcgagtaccgtgaaataa
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