KEGG   Agrobacterium larrymoorei: CFBP5473_07875
Entry
CFBP5473_07875    CDS       T06268                                 
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
alf  Agrobacterium larrymoorei
Pathway
alf02020  Two-component system
Brite
KEGG Orthology (KO) [BR:alf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CFBP5473_07875
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:alf02022]
    CFBP5473_07875
Two-component system [BR:alf02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   CFBP5473_07875
SSDB
Motif
Pfam: Sigma54_activat Response_reg AAA_lid_14 Sigma54_activ_2 HTH_8 Mg_chelatase AAA_5 AAA_2 AAA AAA_16 MCM FleQ ABC_tran B12-binding P-loop_TraG
Other DBs
NCBI-ProteinID: QCI97840
LinkDB
Position
circular:1653613..1654977
AA seq 454 aa
MASDILVVDDEADIREIVAGILSDEGHETRMAHDSDSALAAISERVPRLIFLDIWMQGSK
LDGLALLDEIKSRHPDLPVVMISGHGNIETAVNAIKRGAFDFIEKPFKADRLILIAERAL
ENSKLKREVQELKKRTGDAVELIGASLAVSQLRQTIDRVSPTNSRIMILGPSGSGKELVA
RMIHKKSSRASGPFVALNAATITPERMEIALFGTEGLPGQPRKVGALEEAHRGVLYLDEV
GEMPRETQNKILRVLVDQQFERVGGGKRVKVDVRIISSTALNLENLISEGLFREDLYHRL
AVVPVKVPALSERREDIPFLVDMFIRQISEQAGIRPRKIGDDAMAVLQTHDWPGNIRQLR
NNIERLMILARPEGGDSSITADMLPSDIGDMLPKIAAQGDQHIMTLPLREAREMFERDYL
VAQINRFGGNISRTAEFVGMERSALHRKLKSLGV
NT seq 1365 nt   +upstreamnt  +downstreamnt
atggcgtctgatattctggttgtcgatgacgaggccgatatccgtgaaatcgttgcaggc
attttgtctgacgaaggtcacgaaacccgcatggcgcatgatagcgacagcgcgcttgcc
gccatttccgagcgcgtgccacggctgattttcctcgatatctggatgcagggcagcaag
ctggatggtctggcgcttctggatgagatcaagagccgccatcccgatcttccggtggtg
atgatctccggccacggcaatatcgaaacagcggtcaatgccatcaagcgcggcgctttc
gacttcatcgagaagccattcaaggcagatcggctgatcctgattgccgagcgggctctg
gaaaactccaagctgaaacgcgaggtgcaggagctaaaaaagcgcacgggcgacgctgtt
gaattgatcggcgcatctcttgccgtctcccagcttcgccagacaatcgaccgcgtttcg
ccgaccaacagccgcatcatgatcctcggaccgtccggttccggcaaggagcttgtggcg
cggatgattcataagaagtcttcacgcgcaagcggcccattcgtggcgctaaatgctgcg
acgattacgccggagcggatggaaatcgcgcttttcggcaccgaaggtttgcccggccag
ccgcgcaaggtcggcgcgctggaagaagcacatcgcggtgtgctctatctggacgaagtc
ggcgaaatgccacgcgaaacgcagaacaaaatcctgcgcgttcttgtcgaccagcagttc
gaacgcgtcggcggcggcaagcgggtgaaggtggatgtgcgtattatttcgtctaccgct
ctcaacctcgaaaatctgatttcggaaggtctgttccgcgaggatctgtatcaccgtctg
gcggtcgttccggtcaaggttccagcgctttcggagcgtcgtgaggatattccgtttctg
gtggatatgttcatccgccagatttccgagcaggccggcatccgcccgcgcaagatcggt
gacgacgccatggcagtgctgcagacgcatgactggcccggcaatattcgccagttgcgc
aataatatcgagcgtctgatgatccttgcccgcccggaaggcggggattcgtccatcacc
gccgacatgcttccctccgatattggcgacatgctgcccaagattgcagcccagggcgat
cagcacatcatgaccctgcctctgcgcgaggcacgcgaaatgttcgagcgggattatctc
gtggcgcagatcaaccggttcggcggtaatatttcccgcacggcagagtttgtcggcatg
gagcgctccgctcttcaccgcaaactgaagtcgctcggcgtctga

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