Agrobacterium larrymoorei: CFBP5473_08175
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Entry
CFBP5473_08175 CDS
T06268
Symbol
gyrA
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alf03032
]
CFBP5473_08175 (gyrA)
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_08175 (gyrA)
Enzymes [BR:
alf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
CFBP5473_08175 (gyrA)
DNA replication proteins [BR:
alf03032
]
Prokaryotic type
DNA Topoisomerases
CFBP5473_08175 (gyrA)
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
CFBP5473_08175 (gyrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
QCI97893
UniProt:
A0A4D7DJX9
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All DBs
Position
circular:complement(1712821..1715643)
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AA seq
940 aa
AA seq
DB search
MTDQSPPGGGKLPPGIEPISIMEEMQRSYLDYAMSVIVSRALPDVRDGLKPVHRRILYGM
SELGIDWNKKYVKCARVTGDVMGKYHPHGNSAIYDALARMAQDWSLRLPLIDGQGNFGSI
DGDPPAAERYTECRLEKAAHSLLDDLDKETVDFRDNYDGTLQEPVVVPAKFPNLLVNGAG
GIAVGMATNIPPHNLSEVIDGCIALIDTPEIELPELMQIIPGPDFPTGALIMGRSGIRSA
YETGRGSVIMRGRATIEPMRGDREQIIITEVPYQVNKASMIEKMAELVKEKRIEGISDLR
DESDRQGYRVVVELKRDANADVILNQLYRYTPLQTSFGCNMVALNGGKPEQMTLLDMLRA
FVSFREDVVSRRTKYLLRKARERAHVLVGLAIAVANIDEVIRVIRQAPDPATAREQLMTR
RWPAADVESLILLIDDPRHRINEDGTYNLSEEQARAILELRLARLTALGRDEIGDELNKI
GAEISEYLDILSSRIRIQQIVKDELAAIRDEFGTPRRSEIIEGGPDMDDEDLIAREDMVV
TVSHLGYIKRVPLTTYRAQRRGGKGRSGMATRDEDFVSRLFVVNTHTPVLFFSSRGIVYK
EKVWRLPIGTPQSKGKALINMLPLEPGERITTIMPLPEDETSWENLDVMFATTRGTVRRN
KLSDFVQVNRNGKIAMKLEEEGDEILSVETCTAPNQDLNIPGDDVLLTTALGQAIRFPID
EVRVFAGRNSIGVRGISLADGDRIISMTIVGHVDAEPWERAAYLKRSASERRAAGVDEED
IALVGEEVAEEGQLSDERYAYLKEHEQFVLTVSEKGYGKRSSSYDFRTSGRGGKGIRATD
TSKTGEIGEQIAVFPVEDKDQIMLVTNGGVLIRVPVDGIRIASRATKGVTIFSTAKDEKV
VSVERINEPEGDEEVEALEGAEGVVEGEAGVAPESDSSAE
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
ttgactgaccagagcccccccggcggcggaaagcttccgccaggcatcgaaccaatttcc
atcatggaggaaatgcagcggtcgtatctcgattacgcgatgagcgttatcgtgtcccgc
gcgcttccggatgtccgtgacggtctgaagcccgttcatcgccgtattctttatggcatg
tccgaactcggcatcgactggaacaagaaatacgtcaagtgcgcccgcgtaaccggtgac
gtgatgggtaaataccatccgcacggcaactcggctatttacgatgcgctggcccgtatg
gcgcaggactggtcgttgcgcctgccgcttatcgatggacagggcaatttcggctccatc
gatggggacccgccggcggccgagcgttacaccgaatgccgtctggaaaaggctgcgcat
tcgctgctggacgatctggacaaggaaaccgtcgattttcgcgataactatgacggcacc
ttgcaggagccggtcgtcgttcccgccaaattcccgaaccttttggtcaacggggcaggc
ggcattgccgtcggcatggccacgaacattccgccgcataacctctccgaagtcatcgat
ggctgcatcgcgctcatcgatacgccggagatcgaactgccggaactgatgcagatcatt
ccgggcccggatttccccacaggcgcgctcatcatgggccgctccggtatccgctcggcc
tatgagacgggccgcggctccgtcatcatgcgcggtcgcgccaccatcgaaccgatgcgc
ggcgaccgcgagcagatcatcatcacggaagttccctatcaggtgaacaaggcgtcgatg
atcgaaaagatggctgagctggtcaaggaaaagcgtatcgagggtatttccgaccttcgt
gacgagtccgaccgtcagggctaccgcgtcgtcgtggaactgaagcgcgatgcgaatgcc
gatgtcattctcaaccagctttaccgctacacgcctttgcagacctctttcggctgcaac
atggtggcgctgaatggcggcaagccggagcagatgacgcttctcgacatgctgcgtgcc
ttcgtctcgttccgcgaagacgttgtcagccgccgcaccaagtacctgctgcgcaaggcg
cgcgaacgtgcgcatgtgttggtcggtctcgcaattgccgttgccaatatcgatgaagtt
attcgcgtcatccgccaggcaccggatccggcaaccgcgcgcgaacagttgatgacgcgt
cgctggcccgcggcggacgtggaaagcctgatcctgctgatcgacgatccgcgccaccgc
atcaatgaggacggcacctataacctgtccgaagagcaggcgcgtgcgatcctcgaactc
cgtctggcccgcctgacggctctgggtcgtgacgaaatcggcgatgaactgaacaagatc
ggcgccgaaatcagcgaatatctcgacattctgtcttcgcgcatccgcatccagcaaatc
gtcaaggatgagcttgctgccatccgtgatgaattcggcacgccgcgtcgctccgaaatc
atcgaaggcggcccggatatggacgatgaggacctcatcgcccgcgaagacatggtcgtg
acggtttctcacctcggctacatcaagcgtgttccgctgacgacctaccgtgcacagcgt
cgcggcggcaagggccgctccggcatggcaacgcgggatgaggatttcgtatcgcggctg
ttcgtggtcaacacgcatacgccggttctgttcttctcttcgcgtggcatcgtctacaag
gaaaaggtctggcgcctgccgattggcacgcctcagtccaagggcaaggcgctcatcaat
atgctgccgctggagcccggcgagcgcatcaccacgatcatgccgctgcccgaggatgaa
acttcctgggaaaacctcgacgtcatgttcgcgacgacgcgcggtacggtccgccgtaac
aagctgtccgatttcgttcaggtcaaccgtaacggcaagattgcgatgaagctcgaagaa
gagggcgatgaaatcctctccgtcgaaacctgcaccgcgccgaaccaggacctgaacatt
ccgggtgacgacgttcttctgacgacggctctcggccaggcgatccgcttcccgattgat
gaagtccgtgtctttgcgggccgtaactcgattggtgttcgtggtatctcgcttgccgat
ggcgaccgcatcatctccatgacgattgtcggccatgtcgatgccgagccttgggagcgt
gccgcctatctgaagcgctctgcgagcgagcgtcgcgctgctggtgtcgatgaggaagat
attgcactggttggcgaggaagtggcggaagaaggacagctgtccgacgaacgctatgca
tacctcaaggaacatgagcagttcgttctcaccgtttccgaaaagggttacggcaagcgc
tcgtcctcttacgacttccgtacatcgggtcgtggcggcaagggcatccgcgccaccgat
acctcgaaaaccggggaaatcggcgagcagattgcagtcttcccggtcgaagacaaggac
cagatcatgctcgtcaccaatggcggcgtcctaatccgcgtaccggtggacggcatccgc
atcgcaagccgcgccaccaagggcgtgaccatcttctctaccgccaaggatgagaaggtc
gtatccgtggagcgcatcaacgagccggaaggtgatgaggaagtcgaggctttggagggc
gctgaaggcgttgtcgaaggcgaggctggcgttgcaccggagagcgatagctcagcggaa
taa
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