Agrobacterium larrymoorei: CFBP5473_09280
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Entry
CFBP5473_09280 CDS
T06268
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
alf03032
]
CFBP5473_09280
03036 Chromosome and associated proteins [BR:
alf03036
]
CFBP5473_09280
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_09280
DNA replication proteins [BR:
alf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
CFBP5473_09280
Chromosome and associated proteins [BR:
alf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
CFBP5473_09280
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
CFBP5473_09280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
DUF2267
HU-CCDC81_euk_1
HU-CCDC81_euk_2
DUF2780
Motif
Other DBs
NCBI-ProteinID:
QCI98082
UniProt:
A0A4D7DV76
LinkDB
All DBs
Position
circular:complement(1941398..1941673)
Genome browser
AA seq
91 aa
AA seq
DB search
MNKNELVSAVAEKAGLTKADAASAVDAVFETVQNELKAGGDIRLAGFGSFTVSRREASKG
RNPSTGAEVDIPARNVPKFSAGKGLKDAVNS
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagaacgagctcgtttctgcagttgccgagaaggctggcctcacgaaggctgat
gccgcttctgctgttgacgctgtattcgaaactgtccagaacgaactgaaggctggtggc
gacatccgtctcgctggcttcggcagcttcaccgtcagccgtcgcgaagcctccaagggc
cgtaacccatccacgggtgcagaagtcgatattccggctcgcaacgttccaaagttctcc
gcaggcaagggcctgaaggacgctgtcaactcctaa
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