Agrobacterium larrymoorei: CFBP5473_10270
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Entry
CFBP5473_10270 CDS
T06268
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
alf
Agrobacterium larrymoorei
Pathway
alf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CFBP5473_10270
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
alf03021
]
CFBP5473_10270
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_10270
Enzymes [BR:
alf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CFBP5473_10270
Transcription machinery [BR:
alf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CFBP5473_10270
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CFBP5473_10270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
MinE
Motif
Other DBs
NCBI-ProteinID:
QCI98259
UniProt:
A0A4D7DUR3
LinkDB
All DBs
Position
circular:complement(2131713..2132105)
Genome browser
AA seq
130 aa
AA seq
DB search
MARVTVEDCIDKVDNRFELVLLASHRARQISQGSQITIDRDNDKNPVVALREIADETLSP
DDLKEDLIHSLQKHVEVDEPEPDPVTIAANAGTDSEDDDAPETVTFDQMSEEELLAGIEG
LVPPEKNDDY
NT seq
393 nt
NT seq
+upstream
nt +downstream
nt
atggcccgtgtcaccgtagaagattgcattgataaagtagacaaccgtttcgagctcgtt
ctcctggcaagccaccgcgcccgccagatttcgcagggctcccagattacgatcgatcgc
gataacgacaagaaccctgtggttgctttgcgcgaaatcgccgacgaaacgttgtctccc
gacgacctgaaggaagacctcatccactcgctgcagaagcatgtcgaagtggacgagccc
gagcccgatccggttacgattgctgcaaacgccggaaccgacagcgaagacgacgatgcg
ccggagaccgtgactttcgaccagatgtcggaagaagagcttctggctggcatcgaaggc
cttgtgccgccggaaaagaacgacgattattga
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