Agrobacterium larrymoorei: CFBP5473_10310
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Entry
CFBP5473_10310 CDS
T06268
Name
(GenBank) lytic transglycosylase domain-containing protein
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
alf01011
]
CFBP5473_10310
Enzymes [BR:
alf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
CFBP5473_10310
Peptidoglycan biosynthesis and degradation proteins [BR:
alf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
CFBP5473_10310
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
TPR_16
TPR_19
TPR_4
DUF3731
DUF7552
Motif
Other DBs
NCBI-ProteinID:
QCI99138
UniProt:
A0A4D7DRT1
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All DBs
Position
circular:2140197..2142245
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AA seq
682 aa
AA seq
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MAAGLAATVWSAWAGPAPDGVVPLPFVKPDAPTVPAFLPASPEVTGSIIRPANPLNVSDL
KAGLDALSSRDATRAIAIRNALASGSLDRHILTWAIAISGQKDVPSAEITAAQRELSGWP
GLSTLRANSERAMLRENPTAADVIASFGAAKPETPEGTIALAHALTATGNTARAQQLIRQ
LWVNKGMDTDLEDRVLAEFGNSLSVADHKARMDYLMYRSRVSQAKRFGDLGKAQSLYKAW
AAVLQRANNAPALLNAVDSSWRSDPVYLFAQIESLRHQQKYEDAAKLLAQAPKDQAKLMN
PGEWWNERRIIARGLADLGDFEGAYRIVANHSATSPVDVADAEFHAGWYALRALHQPAVA
AKHFNALLETSNRPLSASRAYYWLGRAAEAGGPGNARDYFSKAAKHPGTFYGQLAAARIG
VTTLNVTYPSPTSGDRERFASREAVRAIERLEAAGYSWRADGIYRALADQIDSPGELAIL
AARAERNNNHQVSLQIGKTAFSRGIDAAALAYPIGVIPVSANISGSGKALAYAIARQESA
FNPAAVSPANARGLLQLLPGTAKGVANRHGMPFTQAKLTTDAGYNATLGAHYLGEQIESF
GGSYILTFIAYNAGPKRVPEWITRYGDPRGKPIDDVVDWIERIPFPETRNYVQRVMENYQ
VYKTRLGQQADIVDDLRNGRSG
NT seq
2049 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaggtctggcagcgaccgtttggagcgcttgggcaggcccagcgcccgatggc
gtcgttcccctgccattcgtcaagcctgacgcgccgacggttccggccttcctgcccgcc
tcaccagaagttaccggctccatcatccgccccgccaatccgcttaacgtttccgatctc
aaggccggtctcgatgcgctttccagccgcgatgcgacgcgggcgattgccattcgcaac
gccttggcatccggcagcctcgaccggcacattctgacttgggcgattgccatttccgga
cagaaggatgtgccttctgccgaaatcacggctgcacaacgcgaactttccggctggccg
gggctctcgaccctgcgcgccaattccgaacgcgccatgctgcgggaaaatccaacggct
gcagatgtcatcgcctccttcggtgcggccaagcccgaaacgccggaaggcacgattgca
cttgcccacgcattgaccgcaactggcaacaccgcccgtgcccagcagctcatccggcag
ctttgggttaataagggcatggataccgatctcgaggatcgcgtccttgcggaattcggc
aattccctttccgttgccgaccacaaggcgcggatggattatctgatgtatcgcagccgc
gtcagccaggcgaaacgctttggcgatctcggcaaggcgcagtcgctctacaaagcgtgg
gcggcagtgcttcaacgggcaaacaacgcccctgctctcctgaatgccgtcgattcttcg
tggcgcagcgatcccgtctatctctttgcgcagatagaaagcctgcgccatcagcagaaa
tatgaggatgccgccaagcttctggcgcaggcgccgaaggatcaggcgaagctgatgaac
cccggcgagtggtggaacgagcggcggatcatcgcgcgtgggctcgcggatcttggtgat
tttgagggtgcgtatcgcatcgtcgcaaatcactccgcaacatctcccgtggatgttgcg
gatgcggaatttcatgccggctggtacgccctgcgcgccctgcaccaacccgcagtcgcc
gcgaagcacttcaacgcgctgcttgaaacatcgaaccggccattgtcggcatcccgcgcc
tattactggctgggccgcgcagcggaagcaggcggaccgggcaatgcgcgcgactatttc
tccaaggcggcgaagcatcccggcactttttatggccagctcgccgctgctcggatcggc
gtgaccacgctcaacgtcacctatccctcgccgacatccggcgatcgcgaacgcttcgcc
agccgcgaagcggtgcgggccatcgaacgtctcgaggccgccggttacagctggcgcgcg
gacggcatctaccgcgccttggccgaccagatcgacagccccggcgagttggcgattctc
gccgcacgtgcggaacgcaacaacaaccaccaagtctcgctgcaaatcggcaaaaccgcc
ttcagccgcggcatcgacgccgcagcgctcgcctatcccatcggcgtgattccggtcagc
gccaatatttccggctccggcaaggctcttgcctacgccattgcccggcaggaaagcgcc
ttcaaccccgccgcagtctcccccgccaatgcgcgcggccttttgcaattactgccggga
accgccaaaggcgtcgccaaccgccacggcatgccgtttacccaggccaagctaacgacg
gatgccggttacaacgctacactgggcgcccattacctcggcgaacagatcgaaagcttc
ggcggctcctacattctcaccttcatcgcctacaacgcaggccccaaacgcgtccccgaa
tggatcacccgctacggcgacccccgcggcaaaccaatcgatgacgtggtggactggata
gaacgcatccccttccccgaaacccgcaactacgtgcagcgggtgatggaaaattatcag
gtgtacaaaacccggcttgggcaacaggcggatattgttgacgacctgaggaatggccgg
tctggctag
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