Agrobacterium larrymoorei: CFBP5473_11235
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Entry
CFBP5473_11235 CDS
T06268
Name
(GenBank) DUF853 domain-containing protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
alf
Agrobacterium larrymoorei
Brite
KEGG Orthology (KO) [BR:
alf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
alf03400
]
CFBP5473_11235
DNA repair and recombination proteins [BR:
alf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
CFBP5473_11235
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
FtsK_SpoIIIE
AAA_30
ResIII
AAA_10
T2SSE
TrwB_AAD_bind
AAA_16
nSTAND3
Hydrolase
T4SS-DNA_transf
Motif
Other DBs
NCBI-ProteinID:
QCI98421
UniProt:
A0A4D7DPE6
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Position
circular:complement(2319610..2321172)
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AA seq
520 aa
AA seq
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MLQDDKLYIGTSRNPDDSLNKGEYLDFRFGNRHGLITGATGTGKTVSLQVLAEGFAKAGV
PVFCADIKGDLSGIAKPGEAKDWVTKRAEQIGFTDLSFEQFPVIFWDLYGEKGHRVRATI
AEMGPLLLARLMDASEAQEGVLNIAFKIADQGGLPLLDLKDLQSLLNYMGEHATELSNQF
GLISKSSVGSLQRGLLVLEQQGAEHFFGEPALKISDIMRTTSDGRGTISVLAADKLMMNP
RLYGTFLLWMLSELFEELPEVGDPAKPKLVFFFDEAHLLFNDAPRVLVERVEQVVRLIRS
KGVGVYFVTQNPLDVPETVLAQLGNRVQHALRAYTPREQKAVKTAADTFRQNPAFNTADA
ITTLGTGEALVSTLQEKGAPSIVERTLVRPPSGRVGPVSDDERRSIMASSPVAGLYDQDV
DRESAFEILAARAQKAAEAEAAKRAAEEQASQQTDSASGRWKLPGFGDEEPKQASTTGAR
RSSGYQRETVIEAAMKSAARSVATSVGRALVRGILGSLRR
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atgttgcaggacgataagctttatattggtacgagccgcaatcccgacgacagtctcaac
aagggcgaatatctcgatttccgtttcggcaaccgccacggcctgatcacaggcgccacc
ggcaccggcaagacggtgtcgctacaggtgctggcggaaggttttgccaaggcgggcgtg
cctgtcttctgcgccgatatcaagggcgatctatccggcatcgcgaagcccggcgaggcc
aaggactgggtgacgaagcgggccgaacagatcggctttaccgacctttccttcgaacag
tttccggtgatcttctgggacctttacggcgaaaagggccaccgcgtccgcgccacgatt
gccgagatggggccgctgcttctggcgcgtctgatggatgcatcggaggcgcaggagggc
gtgctcaacatcgccttcaagatcgccgatcagggcggcctgccgctcttggatctgaag
gatttgcaatccttgctcaactatatgggtgagcatgcgaccgagctttccaatcagttc
ggccttatctccaagtcctccgtcggctcgctgcaacgtggccttctggtgctggaacag
cagggcgcggaacacttcttcggtgaaccggcgctgaagatttccgatatcatgcgcacc
accagcgatgggcgcggcacaatttccgttctcgccgccgacaagctgatgatgaacccg
cgcctttacggcactttcctgctgtggatgctctcagaactgttcgaggaactgccggaa
gtgggtgaccccgccaagccgaagctggtgttctttttcgatgaggcgcatctgctgttc
aacgatgcgccgcgcgtgctggtggagcgcgttgagcaggtcgtgcgcctcatccgctcc
aagggcgtcggcgtttacttcgtcacacagaacccgctggacgtgccggaaaccgtgctg
gcccagctcggtaaccgcgttcagcatgcgctgcgcgcctatacgccacgcgagcagaag
gcggtaaagaccgccgccgatacgttccgccaaaacccggccttcaatacggcggatgcc
atcaccacgctcggcaccggcgaagcgctggtctcgacgcttcaggaaaaaggcgcgccc
tccatcgtggagcgcacactggtccgcccgccatctggccgcgtcggccccgtcagcgat
gacgagcgccgcagcattatggcatccagccctgttgccggtctttacgatcaggacgta
gaccgagaatccgccttcgaaattctcgccgcccgcgctcaaaaggctgcggaagcggaa
gctgccaaacgtgcagcggaggagcaggccagccagcagacggacagcgcttcaggccgc
tggaaactgccgggctttggcgatgaggaaccgaaacaggcatcgacaaccggcgcgcgt
cgctcaagcgggtatcagcgcgagacggtgatcgaggctgcgatgaaaagtgcggcgcgt
tctgtggcgacatcggttggacgggcgcttgtgcgggggattttggggagtttgcggcgg
tag
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